CuGenDBv2

Gene ID	PI0007430
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Kinetochore protein NDC80-like protein
Genome location	chr06:8759269..8761736
RNA-Seq Expression	PI0007430
Synteny	PI0007430
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0051301 - cell division (biological process) GO:0051315 - attachment of mitotic spindle microtubules to kinetochore (biological process) GO:0005634 - nucleus (cellular component) GO:0031262 - Ndc80 complex (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149971.2 kinetochore protein NDC80 homolog isoform X1 [Cucumis sativus]

1.3e-44

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYKT++KPALDSFAEDIRRSSM KLEELISLR QSSENTAKIESKR+HIASLQSH+NEHET+LISLKDE+RDYILRCSTESKKMVED QQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

XP_008439248.1 PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo]

7.5e-45

90.91

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYK++VKPALDSFAEDIRRSSM KLEELISLR QSSENTAKI+SKRN IASLQSHINEHET+LISLKDE+RDYILRCSTESKKMVEDFQQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

XP_011651418.2 kinetochore protein NDC80 homolog [Cucumis sativus]

1.1e-43

88.18

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYKT++KPALDSFAEDIRRSSM KLEELISLR QS+ENTAKIESKR+H+ASLQ HINEHET+LISLKDE+RDYILRCSTESKKMVED QQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

XP_031739032.1 kinetochore protein NDC80 homolog isoform X2 [Cucumis sativus]

1.3e-44

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYKT++KPALDSFAEDIRRSSM KLEELISLR QSSENTAKIESKR+HIASLQSH+NEHET+LISLKDE+RDYILRCSTESKKMVED QQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

XP_038886841.1 LOW QUALITY PROTEIN: kinetochore protein NDC80 homolog [Benincasa hispida]

4.6e-42

89.09

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYKT+VKPALDSFAEDIRRSSMTKLEELISLR QSSENTAKIESKR+HIASLQSHINE ET+LISLK+EIRDY LRCSTESKKMVED QQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VE EA ESLK
Subjt:  VEGEAEESLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCN0 Midasin

2.8e-37

90.72

Show/hide

Query:  SLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADVGKSLDNENSSETELLSEDEATDMSDASKQHDNSEDEWTSIDESMID
        S  LLDKIFN FANLWMSMKVQSTTKEDISSQLYKFKP +FKIEKVIE DVGKS DNENSSETELLSEDEAT+MSDASKQ+DNSEDEWTSIDESMID
Subjt:  SLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADVGKSLDNENSSETELLSEDEATDMSDASKQHDNSEDEWTSIDESMID

A0A1S3AYB0 kinetochore protein NDC80 homolog

3.6e-45

90.91

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYK++VKPALDSFAEDIRRSSM KLEELISLR QSSENTAKI+SKRN IASLQSHINEHET+LISLKDE+RDYILRCSTESKKMVEDFQQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

A0A1S3CGN9 Midasin

1.4e-36

88.66

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Query:  SLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADVGKSLDNENSSETELLSEDEATDMSDASKQHDNSEDEWTSIDESMID
        S  LLDKIFN FANLWMSMKVQSTTKEDISSQLYKF+P +FKIEKVIEADVGKS DNENSSETELLS+DEAT+ SDASKQ+DNSEDEWTSIDESMID
Subjt:  SLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADVGKSLDNENSSETELLSEDEATDMSDASKQHDNSEDEWTSIDESMID

A0A5D3DHD6 Kinetochore protein NDC80-like protein

3.6e-45

90.91

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MGIDYK++VKPALDSFAEDIRRSSM KLEELISLR QSSENTAKI+SKRN IASLQSHINEHET+LISLKDE+RDYILRCSTESKKMVEDFQQEA++LDL
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VEGEAEESLK
Subjt:  VEGEAEESLK

A0A6J1JAC2 kinetochore protein NDC80 homolog

1.4e-36

77.27

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MG+DYKT++KPALDSFAEDI++SSMTKLE+LISLR QSSENTAKIES+R+HI SLQSHI E ET++ SLK+EIRDY LRCSTESKKMVED Q EA+S+D+
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VE EA E LK
Subjt:  VEGEAEESLK

SwissProt top hits

e value

%identity

Alignment

A0A1P8AUY4 Midasin

1.8e-09

41.35

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Query:  EESLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADV---GKSLDNENSSE-TELLSEDE---ATDMSDASKQHDNSEDEWTSI
        E S +LLDKI+   A +WM MK Q+ TK D    LYKF+   FKI+ V+E D+   GK   NE+ SE  E L++D+     DM+   +  +N ED+W  I
Subjt:  EESLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADV---GKSLDNENSSE-TELLSEDE---ATDMSDASKQHDNSEDEWTSI

Query:  DESM
         E +
Subjt:  DESM

Q9M1G5 Kinetochore protein NDC80 homolog

1.1e-17

44.55

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Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MG+DYK+ VKPAL S  + I+ SS  K+EEL++L+H  SE  +KIESKR+ + S+Q  IN+ E ++  +K E ++   +C  E+K +VE  + EA +L++
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VE EA E +K
Subjt:  VEGEAEESLK

Arabidopsis top hits

e value

%identity

Alignment

AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding

1.3e-10

41.35

Show/hide

Query:  EESLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADV---GKSLDNENSSE-TELLSEDE---ATDMSDASKQHDNSEDEWTSI
        E S +LLDKI+   A +WM MK Q+ TK D    LYKF+   FKI+ V+E D+   GK   NE+ SE  E L++D+     DM+   +  +N ED+W  I
Subjt:  EESLKLLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADV---GKSLDNENSSE-TELLSEDE---ATDMSDASKQHDNSEDEWTSI

Query:  DESM
         E +
Subjt:  DESM

AT3G54630.1 CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink).

7.5e-19

44.55

Show/hide

Query:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL
        MG+DYK+ VKPAL S  + I+ SS  K+EEL++L+H  SE  +KIESKR+ + S+Q  IN+ E ++  +K E ++   +C  E+K +VE  + EA +L++
Subjt:  MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDL

Query:  VEGEAEESLK
        VE EA E +K
Subjt:  VEGEAEESLK

Sequences

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CDS sequence

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ATGGGGATTGACTATAAGACATCTGTTAAGCCTGCACTCGATTCCTTTGCAGAGGACATAAGGAGAAGTTCTATGACGAAGTTGGAAGAGTTGATTTCTCTCAGGCACCA
ATCAAGTGAAAATACTGCTAAAATTGAGTCTAAACGCAATCACATAGCTTCCCTTCAATCCCATATTAATGAACATGAAACACGACTAATCTCCTTAAAAGATGAAATAC
GAGATTATATATTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATTTTCAACAAGAAGCTTATAGCTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAG
CTATTGGATAAAATTTTCAATGGATTTGCGAATCTCTGGATGAGTATGAAAGTTCAGTCAACAACTAAAGAAGACATTAGCTCTCAATTATACAAGTTTAAGCCCTGTAT
GTTCAAGATTGAAAAGGTTATTGAAGCTGATGTTGGCAAGTCATTAGATAACGAAAATTCTTCAGAAACAGAGTTACTCTCTGAAGATGAGGCCACCGATATGAGTGATG
CTAGCAAGCAACATGATAATTCAGAAGATGAATGGACGTCAATAGATGAGTCTATGATCGATTAG

mRNA sequence

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Protein sequence

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MGIDYKTSVKPALDSFAEDIRRSSMTKLEELISLRHQSSENTAKIESKRNHIASLQSHINEHETRLISLKDEIRDYILRCSTESKKMVEDFQQEAYSLDLVEGEAEESLK
LLDKIFNGFANLWMSMKVQSTTKEDISSQLYKFKPCMFKIEKVIEADVGKSLDNENSSETELLSEDEATDMSDASKQHDNSEDEWTSIDESMID

PI0007430 (gene) of Melon (PI 482460) v1 genome