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PI0007451 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007451
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:13780942..13781244
RNA-Seq ExpressionPI0007451
SyntenyPI0007451
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025494.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR +LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]3.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR  LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]3.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR  LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

KAA0054148.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR +LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR +LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

TrEMBL top hitse value%identityAlignment
A0A5A7TXW1 Retrotransposon protein1.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR  LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

A0A5A7U476 Retrotransposon protein1.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR  LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

A0A5A7UGH9 Retrotransposon protein1.1e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR +LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

A0A5A7VL29 Retrotransposon protein1.1e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR +LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

A0A5D3BDX0 Retrotransposon protein1.9e-3981Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD
        MKHSSARNVIERAFG+LKGRWAILRG+SYYPVEVQ RTILAC LLHNLINREMTN DI D +DE DST+ATT  +DIHYIETSN WSQWR  LAE MF +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G13770.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).2.6e-0430.68Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTIL-----ACALLHNLINREMTNADIP--DEVDEGDSTYATTGGEDIHYIE
        MK  + R  +ERAFG+L+ R+AI+ G    P  +  +T+L     +C ++HN+I  +  + D P  + V+        TG +D  + E
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTIL-----ACALLHNLINREMTNADIP--DEVDEGDSTYATTGGEDIHYIE

AT5G12010.1 unknown protein4.4e-0440.43Show/hide
Query:  KHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNL
        K S  + V + AFG LKGRWA L+ R+   ++     + AC +LHN+
Subjt:  KHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)5.3e-1033.63Show/hide
Query:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTN--ADIPDEV-DEGDSTYATTGGEDIHYIETSNA----------WS
        ++H S RNVIER FG+ K R+AI +    +  + Q   +L CA LHN + +E  +  AD PDEV +EGD         + + I+               +
Subjt:  MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTN--ADIPDEV-DEGDSTYATTGGEDIHYIETSNA----------WS

Query:  QWRGELAERMFCD
         WR  +AE M+ D
Subjt:  QWRGELAERMFCD

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)3.4e-0435.29Show/hide
Query:  KHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINRE
        +H      I R FG LK R+ IL     YP++ Q + ++A   LHN +  E
Subjt:  KHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATTCTTCCGCACGAAATGTCATCGAAAGAGCGTTCGGCCTGTTGAAGGGTCGATGGGCAATCCTCCGAGGAAGGTCATACTATCCTGTCGAAGTGCAAACTCG
CACGATACTCGCATGTGCCTTACTGCACAATCTCATAAATCGGGAGATGACGAACGCTGACATACCGGACGAAGTTGATGAAGGTGACTCAACGTACGCCACCACTGGTG
GGGAGGACATACACTATATAGAGACGTCCAACGCATGGAGTCAATGGAGGGGCGAGCTTGCAGAAAGAATGTTTTGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATTCTTCCGCACGAAATGTCATCGAAAGAGCGTTCGGCCTGTTGAAGGGTCGATGGGCAATCCTCCGAGGAAGGTCATACTATCCTGTCGAAGTGCAAACTCG
CACGATACTCGCATGTGCCTTACTGCACAATCTCATAAATCGGGAGATGACGAACGCTGACATACCGGACGAAGTTGATGAAGGTGACTCAACGTACGCCACCACTGGTG
GGGAGGACATACACTATATAGAGACGTCCAACGCATGGAGTCAATGGAGGGGCGAGCTTGCAGAAAGAATGTTTTGTGATTGA
Protein sequenceShow/hide protein sequence
MKHSSARNVIERAFGLLKGRWAILRGRSYYPVEVQTRTILACALLHNLINREMTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRGELAERMFCD