; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007458 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007458
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr04:12130913..12132010
RNA-Seq ExpressionPI0007458
SyntenyPI0007458
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031954.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]4.0e-5765.83Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        MDG+  PPRIE EVVN RNCDDR GR+ARGNYRNLHNQ+HARR   DYDPPQ FEE+AQE  EPWQEIQDD+  SS+EQ                     
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF
                          ETVEEMINIR KNMSRKSTW TS+SK PNYFNKA+DQPSTSLQ KGKEVDTQELNSEKRKE  NRSK+QNNYT PSLGKCF
Subjt:  RRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF

KAA0054243.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.2e-3052.32Show/hide
Query:  DPPQLFEENAQEE--PWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNY
        +P +  ++++ EE   WQ  Q+ DS+S DE GN WN +G++RM +    ++ RRE HHDYKMKI LPTYNET+EEM+  R KN++RK+ W T+ SKK +Y
Subjt:  DPPQLFEENAQEE--PWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNY

Query:  FNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF
         N AN QPSTS+ EKGK+V+  E  + K+KE   + +A NNY RPSLGKCF
Subjt:  FNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-2432.37Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        MDG+    RIE    N+RN  +R GR+AR N+RNL NQR+ +R     +P +  + ++ E  E WQ  Q+ DS+SSDEQGN WN + +++M +    ++ 
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------
        +RE HHDYKMKIDLPTY                                                                                   
Subjt:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------

Query:  -------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQ
                                       +TVEEM+  R +N +RK+TW T  SKK +Y NK N+QPSTS+ EK K+V+ QE  + K+KE   + K Q
Subjt:  -------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQ

Query:  NNYTRPSLGKCF
        NNY RPSLGKCF
Subjt:  NNYTRPSLGKCF

TYK30863.1 transposon Ty3-I Gag-Pol polyprotein isoform X1 [Cucumis melo var. makuwa]4.1e-2532.92Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        + G   P RIE      RN ++R GR+AR NY+N  NQR     I    P Q  ++N+QE  E WQ  QD DS+  DEQGN WN DGE RM +     + 
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------
        RRE++HDYKMKIDLPTYN                                                                                  
Subjt:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------

Query:  -----------------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKR
                                                 ETVEEM+ +R KN +R++ W T+ SKK +Y  K ++QPSTS+ +KGK +D QE N  K+
Subjt:  -----------------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKR

Query:  KELTNRSKAQNNYTRPSLGKCF
        KE   R K QNNYTRPSLGKCF
Subjt:  KELTNRSKAQNNYTRPSLGKCF

XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus]1.1e-2229.94Show/hide
Query:  PPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHH
        PPR E    N++   + RGR+ARG  RN++N R  +R    Y   Q  +E+ QE  E WQE Q+DDS+S DEQGN WN + E R  RNN R + RR  +H
Subjt:  PPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHH

Query:  DYKMKIDLPTY-----------------------------------------------------------------------------------------
        DYKMKIDLP Y                                                                                         
Subjt:  DYKMKIDLPTY-----------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------NETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQ
                                                                       ETVEEMI IR+KN++R+S W T+++K     +K NDQ
Subjt:  --------------------------------------------------------------NETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQ

Query:  PSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF
        PSTS + KGKE+D QE+  E++KE T +   QNNY+RPSLGKCF
Subjt:  PSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF

TrEMBL top hitse value%identityAlignment
A0A5A7SLA2 Zf-CCHC domain-containing protein1.9e-5765.83Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        MDG+  PPRIE EVVN RNCDDR GR+ARGNYRNLHNQ+HARR   DYDPPQ FEE+AQE  EPWQEIQDD+  SS+EQ                     
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF
                          ETVEEMINIR KNMSRKSTW TS+SK PNYFNKA+DQPSTSLQ KGKEVDTQELNSEKRKE  NRSK+QNNYT PSLGKCF
Subjt:  RRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF

A0A5A7UE06 Zf-CCHC domain-containing protein1.6e-3052.32Show/hide
Query:  DPPQLFEENAQEE--PWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNY
        +P +  ++++ EE   WQ  Q+ DS+S DE GN WN +G++RM +    ++ RRE HHDYKMKI LPTYNET+EEM+  R KN++RK+ W T+ SKK +Y
Subjt:  DPPQLFEENAQEE--PWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHHDYKMKIDLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNY

Query:  FNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF
         N AN QPSTS+ EKGK+V+  E  + K+KE   + +A NNY RPSLGKCF
Subjt:  FNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCF

A0A5A7UQ86 RNA-directed DNA polymerase-like protein1.1e-1536.04Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        MDG+  P RIE  +  +RN  +R GR+A+ N+ N+ NQR+ +       P +  ++++ E  + WQ  Q+ DS+S DE+GN W+ +G+++M +    ++ 
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYNETVE-EMINIRAKNMSRKSTWVTSTSKKPNYFN-----------KANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSK
        RRE HHDYKMK+DLPTYN   + E    R KN      ++ +  +K  +             K N+QPSTS  EKGK+V+ Q+  + K+KE   + K
Subjt:  RRESHHDYKMKIDLPTYNETVE-EMINIRAKNMSRKSTWVTSTSKKPNYFN-----------KANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSK

A0A5D3CJ99 Reverse transcriptase7.5e-2532.37Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        MDG+    RIE    N+RN  +R GR+AR N+RNL NQR+ +R     +P +  + ++ E  E WQ  Q+ DS+SSDEQGN WN + +++M +    ++ 
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------
        +RE HHDYKMKIDLPTY                                                                                   
Subjt:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------

Query:  -------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQ
                                       +TVEEM+  R +N +RK+TW T  SKK +Y NK N+QPSTS+ EK K+V+ QE  + K+KE   + K Q
Subjt:  -------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQ

Query:  NNYTRPSLGKCF
        NNY RPSLGKCF
Subjt:  NNYTRPSLGKCF

A0A5D3E417 Transposon Ty3-I Gag-Pol polyprotein isoform X12.0e-2532.92Show/hide
Query:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI
        + G   P RIE      RN ++R GR+AR NY+N  NQR     I    P Q  ++N+QE  E WQ  QD DS+  DEQGN WN DGE RM +     + 
Subjt:  MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQE--EPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDI

Query:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------
        RRE++HDYKMKIDLPTYN                                                                                  
Subjt:  RRESHHDYKMKIDLPTYN----------------------------------------------------------------------------------

Query:  -----------------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKR
                                                 ETVEEM+ +R KN +R++ W T+ SKK +Y  K ++QPSTS+ +KGK +D QE N  K+
Subjt:  -----------------------------------------ETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKR

Query:  KELTNRSKAQNNYTRPSLGKCF
        KE   R K QNNYTRPSLGKCF
Subjt:  KELTNRSKAQNNYTRPSLGKCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAATATCGACACCACCGCGTATAGAAACAGAAGTAGTAAACAACCGTAATTGTGATGATAGACGTGGCAGACAAGCAAGGGGAAATTATAGAAACCTCCACAA
CCAACGACATGCTCGGAGAGGAATAATCGATTATGATCCACCGCAACTCTTTGAGGAAAATGCTCAAGAAGAACCATGGCAAGAAATTCAAGATGATGATTCAACGAGTA
GCGACGAACAAGGGAACCAGTGGAACCTTGATGGTGAAGTACGAATGGACCGAAATAATATGAGGAATGATATACGAAGAGAGTCACATCATGACTACAAGATGAAAATA
GACCTCCCAACCTATAATGAAACTGTAGAGGAAATGATTAATATTAGAGCTAAGAACATGAGCCGAAAGTCAACTTGGGTGACATCGACATCTAAGAAGCCGAATTACTT
TAATAAAGCAAATGACCAGCCTTCCACATCATTACAAGAGAAAGGGAAGGAGGTTGATACACAAGAGCTAAATAGTGAGAAAAGGAAAGAGTTAACAAACAGAAGCAAGG
CCCAAAATAATTACACTCGTCCATCATTGGGCAAGTGTTTTGGTGTGACCAAACAGGTCACTTATCCAATACTTGCCCTCAATGAAAGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAATATCGACACCACCGCGTATAGAAACAGAAGTAGTAAACAACCGTAATTGTGATGATAGACGTGGCAGACAAGCAAGGGGAAATTATAGAAACCTCCACAA
CCAACGACATGCTCGGAGAGGAATAATCGATTATGATCCACCGCAACTCTTTGAGGAAAATGCTCAAGAAGAACCATGGCAAGAAATTCAAGATGATGATTCAACGAGTA
GCGACGAACAAGGGAACCAGTGGAACCTTGATGGTGAAGTACGAATGGACCGAAATAATATGAGGAATGATATACGAAGAGAGTCACATCATGACTACAAGATGAAAATA
GACCTCCCAACCTATAATGAAACTGTAGAGGAAATGATTAATATTAGAGCTAAGAACATGAGCCGAAAGTCAACTTGGGTGACATCGACATCTAAGAAGCCGAATTACTT
TAATAAAGCAAATGACCAGCCTTCCACATCATTACAAGAGAAAGGGAAGGAGGTTGATACACAAGAGCTAAATAGTGAGAAAAGGAAAGAGTTAACAAACAGAAGCAAGG
CCCAAAATAATTACACTCGTCCATCATTGGGCAAGTGTTTTGGTGTGACCAAACAGGTCACTTATCCAATACTTGCCCTCAATGAAAGACGATAG
Protein sequenceShow/hide protein sequence
MDGISTPPRIETEVVNNRNCDDRRGRQARGNYRNLHNQRHARRGIIDYDPPQLFEENAQEEPWQEIQDDDSTSSDEQGNQWNLDGEVRMDRNNMRNDIRRESHHDYKMKI
DLPTYNETVEEMINIRAKNMSRKSTWVTSTSKKPNYFNKANDQPSTSLQEKGKEVDTQELNSEKRKELTNRSKAQNNYTRPSLGKCFGVTKQVTYPILALNERR