; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007476 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007476
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:9086291..9088627
RNA-Seq ExpressionPI0007476
SyntenyPI0007476
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.4e-6368.69Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPP
        Q D DVTQEYIH Y NITRLYIT+LGA     RSN+ RLRDV DD QQVLDICNNN+R++EEIH MY +PIVPP ++ GRV+VEE ELDEVYHNVEE+ P
Subjt:  QRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR
         TQ Q+QTGYGSPM+MM  FG GYC         DS VGPSS YMD GPSTSYM  HGH    GEHNEYLY+E  T+V D QEYQQE ENQEEL Q R
Subjt:  VTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.8e-7363.9Show/hide
Query:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVV
        +RW+DQFCVTR ATHVVSQYRYMF LLQRDQ                                            DVTQEYIHWYNNITRLYITR  A V
Subjt:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVV

Query:  GHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVV
        GHLRSN+ RLRDV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FG GY DS V
Subjt:  GHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVV

Query:  G---------PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL
        G         PSSLYMD GPS  YM  HGH RG GEHN+YL
Subjt:  G---------PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.1e-6870.15Show/hide
Query:  ALLQRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEE
        ++ Q D+DVTQEYIHWY+NITRLYITR GA VG  RSN+ RLRDV DD QQ LDICNNNERY+EEIH MYD+PIVPPPV+ G VRVEE ELD+VYHNVEE
Subjt:  ALLQRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQP
        VP  TQTQSQTGYGSPM MM  F  GYC         D+ VGPSS Y+D  PSTSYM  HGH RG GEHNEYLY+E   DV D QEYQQE ENQE+  Q 
Subjt:  VPPVTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQP

Query:  R
        R
Subjt:  R

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.6e-6863.36Show/hide
Query:  TRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRR
        +R ATHVVSQYRYMF LLQRDQ                                            DVTQEYIHWYNNITRLYITR GA VGHLRSN+ R
Subjt:  TRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRR

Query:  LRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVVG--------
        LRDV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FG GY DS VG        
Subjt:  LRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVVG--------

Query:  -PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL
         PSSLYMD GPS  YM  HGH RG GEHN+YL
Subjt:  -PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.7e-7958.16Show/hide
Query:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ---------------------------------------------------------------------
        +RWRDQFCV RSAT+VV+QYRYMF LLQRDQ                                                                     
Subjt:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ---------------------------------------------------------------------

Query:  DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQT
        DVTQEYIH YNNITRLYITR GA+VGHLRSN+ RLRDV +DPQQVLDICNNNERY+E+IH +YD+PIVPPPV+  R RVEE ELDEVYHNVEEVPP TQT
Subjt:  DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQT

Query:  QSQTGYGSPMMMMLAFGTGYCDS---------VVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR
        QSQTGYGSPM MM  FG GYCDS         VVGP S YMD GPSTSYM  +GHGRG GEHNEYLY+E  TDV D QEYQQE +NQE+  Q R
Subjt:  QSQTGYGSPMMMMLAFGTGYCDS---------VVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.1e-6368.69Show/hide
Query:  QRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPP
        Q D DVTQEYIH Y NITRLYIT+LGA     RSN+ RLRDV DD QQVLDICNNN+R++EEIH MY +PIVPP ++ GRV+VEE ELDEVYHNVEE+ P
Subjt:  QRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPP

Query:  VTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR
         TQ Q+QTGYGSPM+MM  FG GYC         DS VGPSS YMD GPSTSYM  HGH    GEHNEYLY+E  T+V D QEYQQE ENQEEL Q R
Subjt:  VTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.3e-7363.9Show/hide
Query:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVV
        +RW+DQFCVTR ATHVVSQYRYMF LLQRDQ                                            DVTQEYIHWYNNITRLYITR  A V
Subjt:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVV

Query:  GHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVV
        GHLRSN+ RLRDV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FG GY DS V
Subjt:  GHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVV

Query:  G---------PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL
        G         PSSLYMD GPS  YM  HGH RG GEHN+YL
Subjt:  G---------PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.5e-6870.15Show/hide
Query:  ALLQRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEE
        ++ Q D+DVTQEYIHWY+NITRLYITR GA VG  RSN+ RLRDV DD QQ LDICNNNERY+EEIH MYD+PIVPPPV+ G VRVEE ELD+VYHNVEE
Subjt:  ALLQRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQP
        VP  TQTQSQTGYGSPM MM  F  GYC         D+ VGPSS Y+D  PSTSYM  HGH RG GEHNEYLY+E   DV D QEYQQE ENQE+  Q 
Subjt:  VPPVTQTQSQTGYGSPMMMMLAFGTGYC---------DSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQP

Query:  R
        R
Subjt:  R

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.2e-6863.36Show/hide
Query:  TRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRR
        +R ATHVVSQYRYMF LLQRDQ                                            DVTQEYIHWYNNITRLYITR GA VGHLRSN+ R
Subjt:  TRSATHVVSQYRYMFALLQRDQ--------------------------------------------DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRR

Query:  LRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVVG--------
        LRDV DDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNVEEVPP TQTQSQTGYGSPM MM  FG GY DS VG        
Subjt:  LRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVVG--------

Query:  -PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL
         PSSLYMD GPS  YM  HGH RG GEHN+YL
Subjt:  -PSSLYMDAGPSTSYMHEHGHGRGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein8.1e-8058.16Show/hide
Query:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ---------------------------------------------------------------------
        +RWRDQFCV RSAT+VV+QYRYMF LLQRDQ                                                                     
Subjt:  TRWRDQFCVTRSATHVVSQYRYMFALLQRDQ---------------------------------------------------------------------

Query:  DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQT
        DVTQEYIH YNNITRLYITR GA+VGHLRSN+ RLRDV +DPQQVLDICNNNERY+E+IH +YD+PIVPPPV+  R RVEE ELDEVYHNVEEVPP TQT
Subjt:  DVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNERYIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQT

Query:  QSQTGYGSPMMMMLAFGTGYCDS---------VVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR
        QSQTGYGSPM MM  FG GYCDS         VVGP S YMD GPSTSYM  +GHGRG GEHNEYLY+E  TDV D QEYQQE +NQE+  Q R
Subjt:  QSQTGYGSPMMMMLAFGTGYCDS---------VVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTDVPDPQEYQQESENQEELGQPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTGGGAACGATTTCTCACAATGGCTCCACAACTAAGACATGCAAACAATCATCTACTACCTGGACAAGCACACGATGGAGAGACCAATTTTGTGTAACAAGATC
AGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGCTCTTCTTCAACGTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACA
TCACTCGACTAGGAGCAGTTGTAGGTCATCTGAGATCGAACAGCAGAAGACTTCGTGATGTTACAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAAAGG
TACATAGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAACATGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGT
AGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCTAGCATTTGGAACAGGATATTGTGATTCTGTGGTCGGTCCAT
CGTCTTTATACATGGATGCCGGACCATCAACTTCTTACATGCATGAACATGGACACGGTCGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAACACTTACAGAC
GTCCCAGATCCACAAGAGTACCAACAAGAATCAGAAAATCAAGAGGAGCTAGGGCAACCAAGAAACCTATTCCCCACTATCATTATCTTGCCGCCGCTCCTTTCTCCTTG
TTACTCTCGGAAGCTTGCGGAAGAACTTCAGAGGAATTTGGGTTTTGAATCGAGTATTGCCTTGCACCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTGGGAACGATTTCTCACAATGGCTCCACAACTAAGACATGCAAACAATCATCTACTACCTGGACAAGCACACGATGGAGAGACCAATTTTGTGTAACAAGATC
AGCTACTCATGTAGTTAGTCAATATAGGTACATGTTTGCTCTTCTTCAACGTGATCAGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACA
TCACTCGACTAGGAGCAGTTGTAGGTCATCTGAGATCGAACAGCAGAAGACTTCGTGATGTTACAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAAAGG
TACATAGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCAGTTAACATGGGACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGT
AGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCTAGCATTTGGAACAGGATATTGTGATTCTGTGGTCGGTCCAT
CGTCTTTATACATGGATGCCGGACCATCAACTTCTTACATGCATGAACATGGACACGGTCGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAACACTTACAGAC
GTCCCAGATCCACAAGAGTACCAACAAGAATCAGAAAATCAAGAGGAGCTAGGGCAACCAAGAAACCTATTCCCCACTATCATTATCTTGCCGCCGCTCCTTTCTCCTTG
TTACTCTCGGAAGCTTGCGGAAGAACTTCAGAGGAATTTGGGTTTTGAATCGAGTATTGCCTTGCACCTGTAA
Protein sequenceShow/hide protein sequence
MGLGTISHNGSTTKTCKQSSTTWTSTRWRDQFCVTRSATHVVSQYRYMFALLQRDQDVTQEYIHWYNNITRLYITRLGAVVGHLRSNSRRLRDVTDDPQQVLDICNNNER
YIEEIHYMYDIPIVPPPVNMGRVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMLAFGTGYCDSVVGPSSLYMDAGPSTSYMHEHGHGRGRGEHNEYLYYETLTD
VPDPQEYQQESENQEELGQPRNLFPTIIILPPLLSPCYSRKLAEELQRNLGFESSIALHL