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PI0007492 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007492
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSphingolipid delta(4)-desaturase DES1-like
Genome locationchr04:2186132..2186592
RNA-Seq ExpressionPI0007492
SyntenyPI0007492
Gene Ontology termsGO:0046513 - ceramide biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042284 - sphingolipid delta-4 desaturase activity (molecular function)
InterPro domainsIPR013866 - Sphingolipid delta4-desaturase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1844386.1 unnamed protein product [Ananas comosus var. bracteatus]1.7e-0865.31Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

GAV77917.1 FA_desaturase domain-containing protein/Lipid_DES domain-containing protein [Cephalotus follicularis]1.7e-0863.79Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL   K      TAV+ +   CT TL+H
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH

KAG2687562.1 hypothetical protein I3760_09G057500 [Carya illinoinensis]6.5e-0862.07Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH
        +WSY DEPHA+ RRQI S+YPQIK+LFGPDP  L+K S    TAVL     CT TL+H
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH

XP_020083624.1 sphingolipid delta(4)-desaturase DES1-like [Ananas comosus]1.7e-0865.31Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

XP_022720473.1 sphingolipid delta(4)-desaturase DES1-like [Durio zibethinus]6.5e-0863.27Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQI+ELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

TrEMBL top hitse value%identityAlignment
A0A199VZX2 Sphingolipid delta(4)-desaturase DES1-like8.3e-0965.31Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

A0A1Q3CCG9 Sphingolipid delta(4)-desaturase DES1-like8.3e-0963.79Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL   K      TAV+ +   CT TL+H
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVH

A0A6P5WWK2 Sphingolipid delta(4)-desaturase DES1-like3.1e-0863.27Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQI+ELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

A0A6P5X8L0 Sphingolipid delta(4)-desaturase DES1-like3.1e-0878.95Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQS
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL  +K S
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQS

A0A6V7QNP0 Sphingolipid delta(4)-desaturase DES1-like8.3e-0965.31Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT
        +WSY DEPHAS RRQI SQYPQIKELFGPDPL  +K S + F  +   T
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVT

SwissProt top hitse value%identityAlignment
O15121 Sphingolipid delta(4)-desaturase DES15.9e-0456.67Show/hide
Query:  WSYMDEPHASSRRQIPSQYPQIKELFGPDP
        W Y D+PHA  RR+I ++YP+IK L  PDP
Subjt:  WSYMDEPHASSRRQIPSQYPQIKELFGPDP

O44186 Putative sphingolipid delta(4)-desaturase4.1e-0565.52Show/hide
Query:  WSYMDEPHASSRRQIPSQYPQIKELFGPD
        W+Y +EPHAS R++I ++YPQIKELFG D
Subjt:  WSYMDEPHASSRRQIPSQYPQIKELFGPD

Q5RE51 Sphingolipid delta(4)-desaturase DES15.9e-0456.67Show/hide
Query:  WSYMDEPHASSRRQIPSQYPQIKELFGPDP
        W Y D+PHA  RR+I ++YP+IK L  PDP
Subjt:  WSYMDEPHASSRRQIPSQYPQIKELFGPDP

Q6H5U3 Sphingolipid delta(4)-desaturase DES1-like2.3e-0866.67Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK
        +WSY DEPHA+ RR+I +++PQIKELFGPDPL  +K
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK

Q9ZPH4 Sphingolipid delta(4)-desaturase DES1-like3.9e-0869.44Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK
        +WSY DEPHAS RRQI S YPQI++LFGPDP   +K
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK

Arabidopsis top hitse value%identityAlignment
AT4G04930.1 fatty acid desaturase family protein2.8e-0969.44Show/hide
Query:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK
        +WSY DEPHAS RRQI S YPQI++LFGPDP   +K
Subjt:  YWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTACTGGTCATACATGGACGAGCCTCACGCTTCAAGCAGGCGCCAGATTCCCTCTCAATACCCTCAAATCAAGGAACTCTTTGGCCCCGATCCCCTGCCTCT
TATTAAGCAATCGGATCTTGCCTTTACAGCGGTTTTGAGAGTTACTGCTAAATGTACCATCACATTGGTTCATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTACTGGTCATACATGGACGAGCCTCACGCTTCAAGCAGGCGCCAGATTCCCTCTCAATACCCTCAAATCAAGGAACTCTTTGGCCCCGATCCCCTGCCTCT
TATTAAGCAATCGGATCTTGCCTTTACAGCGGTTTTGAGAGTTACTGCTAAATGTACCATCACATTGGTTCATCTTTAG
Protein sequenceShow/hide protein sequence
MASYWSYMDEPHASSRRQIPSQYPQIKELFGPDPLPLIKQSDLAFTAVLRVTAKCTITLVHL