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PI0007505 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007505
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:11966057..11966332
RNA-Seq ExpressionPI0007505
SyntenyPI0007505
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.9e-3279.12Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

KAA0050408.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-3279.12Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QTQ+    VSP+MMM  FGT YYD GVGQSSDFGTGYYNSEA PSSSNFGQ YYDLG DPSSSYMHGHGRG GEHNEYLYY+ PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-3179.78Show/hide
Query:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMH HGRGRGEHNEYLYYE PA VPK
Subjt:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.5e-3278.02Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QT++    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-3279.78Show/hide
Query:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein9.2e-3379.12Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.4e-3379.12Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QTQ+    VSP+MMM  FGT YYD GVGQSSDFGTGYYNSEA PSSSNFGQ YYDLG DPSSSYMHGHGRG GEHNEYLYY+ PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.0e-3279.78Show/hide
Query:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMH HGRGRGEHNEYLYYE PA VPK
Subjt:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein2.7e-3278.02Show/hide
Query:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        M QT++    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-3279.78Show/hide
Query:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK
        QTQ+    VSP+MMM  FGT YYDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG DPSSSYMHGHGRGRGEHNEYLYYE PA VP+
Subjt:  QTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAAACACAAAACGGGACTGGTGACGTTAGTCCAATGATGATGATGCAGGTATTTGGAACGAGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGAC
AGGATATTACAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGATCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTC
GTGGAGAACATAACGAATATTTGTACTATGAAGCGCCTGCAGTGGTACCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAAACACAAAACGGGACTGGTGACGTTAGTCCAATGATGATGATGCAGGTATTTGGAACGAGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGAC
AGGATATTACAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGATCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTC
GTGGAGAACATAACGAATATTTGTACTATGAAGCGCCTGCAGTGGTACCCAAGTAG
Protein sequenceShow/hide protein sequence
MRQTQNGTGDVSPMMMMQVFGTRYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGIDPSSSYMHGHGRGRGEHNEYLYYEAPAVVPK