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PI0007518 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007518
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLYR motif-containing protein 4
Genome locationchr12:644767..645465
RNA-Seq ExpressionPI0007518
SyntenyPI0007518
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807263.1 putative complex 1 LYR protein [Helianthus annuus]2.8e-2875Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATP+ SEIL+LFRSLLR+ARQFPDYNIREYTKRRTID+FR N++LS+ SSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3390.8Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA P+ SEIL+LFRSLLRTARQFPDYNIREYTKRRTID+FRENQSLSD SSISS YAGG+AQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]4.0e-3593.18Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATP++SEILSLFRSLLRTARQFPDYNIREY KRRTIDSFRENQ+LSDASSISS YAGGRAQLEVAKRQA+VYSLYAPKVKSIMDVNH
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]9.1e-3290.7Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        MATP+ SEILSLFRSLLRTARQF DYNIREYTKRR ID+FREN+SLSD SSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]6.8e-3594.25Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MATP+ SE+LSLFRSLLRTARQFPDYNIREYTKRRTID+FRENQSLSDASSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.9e-3593.18Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATP++SEILSLFRSLLRTARQFPDYNIREY KRRTIDSFRENQ+LSDASSISS YAGGRAQLEVAKRQA+VYSLYAPKVKSIMDVNH
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

A0A1S3XFP4 LYR motif-containing protein 41.1e-2773.56Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+P+  E+L+LFRSLL+TARQFPDYNIREYTKRRTID FR+N+ LSD S +++A++ GRAQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1U7V895 LYR motif-containing protein 42.5e-2772.41Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+P+  E+L+LFRSLL+TARQFPDYNIREYTKRRTID FR+N+ LSD S +++A++ GR+QLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A251UU63 Putative complex 1 LYR protein1.3e-2875Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATP+ SEIL+LFRSLLR+ARQFPDYNIREYTKRRTID+FR N++LS+ SSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

A0A6J1C8A4 LYR motif-containing protein 44.4e-3290.7Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        MATP+ SEILSLFRSLLRTARQF DYNIREYTKRR ID+FREN+SLSD SSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV

SwissProt top hitse value%identityAlignment
B5X5U9 LYR motif-containing protein 4A3.1e-0634.21Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY
        MA  + ++++SL+R L++ +++FP YN R Y  RR  DSFREN  + +  ++       R  L V +RQ  +  +Y
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY

B5XD90 LYR motif-containing protein 4B1.2e-0735Show/hide
Query:  SSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMD
        ++++LSL+R L++ + +FP YN R Y  RR  D+FR N+S+ D   +      GR  L++ +RQ  +  +Y P  K+I++
Subjt:  SSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMD

B8JLQ0 LYR motif-containing protein 43.1e-0635.06Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA
        MA+ + ++++SL+R L++ +++FP YN R Y  RR  D FREN  + +  ++       R  L V KRQ  +  LY+
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA

Q6Q560 Protein ISD116.9e-0632.88Show/hide
Query:  PTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY
        PT  ++LSL++  ++ A QF +YN REY   +T  +FR+N +  D   + + +   +  L V KRQ+++  +Y
Subjt:  PTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY

Q9HD34 LYR motif-containing protein 41.1e-0636.36Show/hide
Query:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA
        MA  + +++LSL+R++LR +++F  YN R Y  RR  D+FREN+++ D   I +     +  L V +RQ  +  LY+
Subjt:  MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein1.7e-2059.76Show/hide
Query:  TSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        +SSE+LSL R+LLR  RQFPDYNIREY+KRRT+D FR N++L+D S ++ AYA  + QL VA+R   VY  Y PK K+IM+V
Subjt:  TSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCAACGAGTTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGTACGGCGCGTCAATTTCCTGATTACAACATCAGAGAATACACCAAACGCCGTACCAT
TGATTCCTTCCGAGAAAATCAGAGCCTCTCCGACGCTTCATCCATCTCCTCTGCCTACGCTGGCGGCAGAGCTCAGCTCGAGGTTGCCAAGCGCCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACCATTGA
mRNA sequenceShow/hide mRNA sequence
CAAAACTAGAGCTTCGCGATTTTTATCCTCTACTTCTTCTCTCTATCCCTTGACTCTTCCTCCATAGATGGCAACTCCAACGAGTTCTGAGATCCTCTCGCTCTTTCGTT
CTCTCCTGCGTACGGCGCGTCAATTTCCTGATTACAACATCAGAGAATACACCAAACGCCGTACCATTGATTCCTTCCGAGAAAATCAGAGCCTCTCCGACGCTTCATCC
ATCTCCTCTGCCTACGCTGGCGGCAGAGCTCAGCTCGAGGTTGCCAAGCGCCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACCA
TTGATTTCCATTTCTTTTCTTTTTTTTCTTTTTTGGCTCGATGAATTTGTAGTATTTGAGAAGTTTTGTGAGAATTGAACTGTAAACTGACATTCTGTTGTTATTAACGA
TGAGCAAAGTTTTTTCCATCCCATCCTGAAATTCTCTTGCGAGGTTAATTCCGAAAGGAAAATTAGGGATTTTTTTCTCTTTTCACCAATTTATCCAGTCTTGAGTCCTG
TTATGATGTATTCCTGAATTTTCTCTTCTGGGTTTTAAATAATGTCTGATCATCCAATTGGAATTCAGAATGGCAATGAGCCATGTTCTTAATTAGGGATATGAACACTA
TCTTTGACTTGGATGGCAACCCTGTTACTTGATGAAGAA
Protein sequenceShow/hide protein sequence
MATPTSSEILSLFRSLLRTARQFPDYNIREYTKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH