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PI0007549 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007549
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationchr02:12326165..12327777
RNA-Seq ExpressionPI0007549
SyntenyPI0007549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637350.1 hypothetical protein CSA_011900, partial [Cucumis sativus]4.0e-0770.91Show/hide
Query:  VIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGI
        +IEE+K+EKEDE VK EQNQED + +SE ILFT +RRQKGK VVD DD+ETEE I
Subjt:  VIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGI

KAE8647490.1 hypothetical protein Csa_003352 [Cucumis sativus]2.6e-0658Show/hide
Query:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW
        ++I  MF K Y K+LS+S+I   L  PDGREWK+GLT  DN  VWL+KGW
Subjt:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW

KAE8652864.1 hypothetical protein Csa_013007, partial [Cucumis sativus]2.1e-0856.1Show/hide
Query:  VKHQMIAMKKKYEEGKQNKTKPIPIPIVIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGI
        +KH M  MKK+    K  + +      +IEE+K+EKEDE VK EQNQED + +SE ILFT +RRQKGK VVD DD+ETEE I
Subjt:  VKHQMIAMKKKYEEGKQNKTKPIPIPIVIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGI

TYK04964.1 B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa]4.0e-0758.33Show/hide
Query:  VKVGFALFIEIVMVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQK
        VKV    FI+ VM+IL MF KD+ K+LS  +I   L   +GREWK GLTK DND VWLQK
Subjt:  VKVGFALFIEIVMVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQK

XP_031742404.1 B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus]2.6e-0658Show/hide
Query:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW
        ++I  MF K Y K+LS+S+I   L  PDGREWK+GLT  DN  VWL+KGW
Subjt:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW

TrEMBL top hitse value%identityAlignment
A0A0A0KL64 Uncharacterized protein1.3e-0658Show/hide
Query:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW
        ++I  MF K Y K+LS+S+I   L  PDGREWK+GLT  DN  VWL+KGW
Subjt:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW

A0A0A0LW59 Uncharacterized protein1.9e-1055.91Show/hide
Query:  VKHQMIAMKKKYEEGKQNKTKPIPIPIVIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGIDSDSSQENEEE
        +KH M  MKK+    K  + +      +IEE+K+EKEDE VK EQNQED + +SE ILFT +RRQKGK VVD DD+ETEE I SDS ++ EEE
Subjt:  VKHQMIAMKKKYEEGKQNKTKPIPIPIVIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGIDSDSSQENEEE

A0A5D3C119 B3 domain-containing transcription factor VRN1-like1.9e-0758.33Show/hide
Query:  VKVGFALFIEIVMVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQK
        VKV    FI+ VM+IL MF KD+ K+LS  +I   L   +GREWK GLTK DND VWLQK
Subjt:  VKVGFALFIEIVMVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQK

A0A5D3CM75 B3 domain-containing transcription factor VRN1-like isoform X28.2e-0660Show/hide
Query:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW
        ++I  MF KDY K LS  +I   L  PDGREWKVGLT  DN  VWLQ+GW
Subjt:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW

A0A6J1KQQ1 B3 domain-containing transcription factor VRN1-like isoform X19.0e-0556Show/hide
Query:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW
        ++I   F KDY ++LSTS+    L  PDG EWKVGLT   N VVWLQ GW
Subjt:  MVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGAAGATAGTGAAACATCAGATGATAGCGATGAAAAAAAAATATGAAGAGGGGAAACAAAACAAAACAAAGCCAATACCAATACCAATTGTCATTGAAGAAAG
AAAAATAGAAAAAGAGGATGAGAGAGTTAAAGGGGAGCAAAATCAAGAAGATTCAAATATTGATAGTGAAGGAATTTTGTTTACAACAAAAAGAAGACAAAAGGGGAAAG
AAGTTGTTGATGTTGATGATAATGAAACTGAAGAAGGGATTGATAGTGATAGTAGTCAAGAAAATGAAGAAGAAGAAATAGAAACACAAGGAAGCAAAAGAAAAAACAAG
AAAAAGCAAAAGAAGTACGTGATTTTCAGAAACAATGTGCAAGATGCTGCTATTTGGACCAAGAACAAAAAGATCCAGAAGGAAAAGAAAAAACGTGCAAGATGTTATGA
TGGGCAAGATGTGAAGGTTGGCTTTGCCCTCTTTATTGAAATTGTGATGGTGATTCTGAATATGTTTACAAAAGACTATAGTAAGATCTTATCAACTTCCTTGATTTCGA
AGCCTCTTCCGAATCCAGATGGAAGGGAATGGAAGGTGGGTTTGACAAAGGAAGATAACGACGTTGTTTGGCTGCAAAAAGGATGGGGTCTTAGAACACTAGAACCCATT
CTTCTGCAGTATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGAAGATAGTGAAACATCAGATGATAGCGATGAAAAAAAAATATGAAGAGGGGAAACAAAACAAAACAAAGCCAATACCAATACCAATTGTCATTGAAGAAAG
AAAAATAGAAAAAGAGGATGAGAGAGTTAAAGGGGAGCAAAATCAAGAAGATTCAAATATTGATAGTGAAGGAATTTTGTTTACAACAAAAAGAAGACAAAAGGGGAAAG
AAGTTGTTGATGTTGATGATAATGAAACTGAAGAAGGGATTGATAGTGATAGTAGTCAAGAAAATGAAGAAGAAGAAATAGAAACACAAGGAAGCAAAAGAAAAAACAAG
AAAAAGCAAAAGAAGTACGTGATTTTCAGAAACAATGTGCAAGATGCTGCTATTTGGACCAAGAACAAAAAGATCCAGAAGGAAAAGAAAAAACGTGCAAGATGTTATGA
TGGGCAAGATGTGAAGGTTGGCTTTGCCCTCTTTATTGAAATTGTGATGGTGATTCTGAATATGTTTACAAAAGACTATAGTAAGATCTTATCAACTTCCTTGATTTCGA
AGCCTCTTCCGAATCCAGATGGAAGGGAATGGAAGGTGGGTTTGACAAAGGAAGATAACGACGTTGTTTGGCTGCAAAAAGGATGGGGTCTTAGAACACTAGAACCCATT
CTTCTGCAGTATCAATGA
Protein sequenceShow/hide protein sequence
MNKKIVKHQMIAMKKKYEEGKQNKTKPIPIPIVIEERKIEKEDERVKGEQNQEDSNIDSEGILFTTKRRQKGKEVVDVDDNETEEGIDSDSSQENEEEEIETQGSKRKNK
KKQKKYVIFRNNVQDAAIWTKNKKIQKEKKKRARCYDGQDVKVGFALFIEIVMVILNMFTKDYSKILSTSLISKPLPNPDGREWKVGLTKEDNDVVWLQKGWGLRTLEPI
LLQYQ