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PI0007566 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007566
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:19950357..19951162
RNA-Seq ExpressionPI0007566
SyntenyPI0007566
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0043167 - ion binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-1646.27Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS
              H    K   +  SSS+VAAAT     PS
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS

KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-1747.29Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA TH+  + E+SF KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS
              H    K   +  SSS+VAAAT S
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.7e-1834.87Show/hide
Query:  MKSFFIGRKLWRVVTEDILKPVK--------------------------------------------------GASKEE---------------------
        M+SF IGRKLWR+VT DI KPVK                                                  G S  E                     
Subjt:  MKSFFIGRKLWRVVTEDILKPVK--------------------------------------------------GASKEE---------------------

Query:  -----VLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTI
             VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +              
Subjt:  -----VLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTI

Query:  FYSTTSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS
          +       H    K   +  SSS+VAAAT     PS
Subjt:  FYSTTSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS

TYK14220.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]6.9e-1742.07Show/hide
Query:  MKSFFIGRKLWRVVTEDILKPVKG----------------ASKEEVLMGLT------------------------FEYESVPATLLPRSLFPSLDVAIQE
        M+SF IGRKLWR+VT DI KPVK                 A+  ++++  T                         EYESV A LL R+  PSLD  +QE
Subjt:  MKSFFIGRKLWRVVTEDILKPVKG----------------ASKEEVLMGLT------------------------FEYESVPATLLPRSLFPSLDVAIQE

Query:  ILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFS
        ILFEEKRL +I S+  DV LA  HL  + E+SF KN K HG+KF+
Subjt:  ILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFS

XP_008445037.1 PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo]2.0e-1647.29Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS
              H    K   +  SSS+VAAAT S
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS

TrEMBL top hitse value%identityAlignment
A0A1S3BBA1 uncharacterized protein LOC1034882009.7e-1747.29Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS
              H    K   +  SSS+VAAAT S
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS

A0A5A7TXR0 Putative mitochondrial protein1.5e-1747.29Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA TH+  + E+SF KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS
              H    K   +  SSS+VAAAT S
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPS

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-1834.87Show/hide
Query:  MKSFFIGRKLWRVVTEDILKPVK--------------------------------------------------GASKEE---------------------
        M+SF IGRKLWR+VT DI KPVK                                                  G S  E                     
Subjt:  MKSFFIGRKLWRVVTEDILKPVK--------------------------------------------------GASKEE---------------------

Query:  -----VLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTI
             VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +              
Subjt:  -----VLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTI

Query:  FYSTTSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS
          +       H    K   +  SSS+VAAAT     PS
Subjt:  FYSTTSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS

A0A5D3CS33 Zinc finger, CCHC-type3.3e-1742.07Show/hide
Query:  MKSFFIGRKLWRVVTEDILKPVKG----------------ASKEEVLMGLT------------------------FEYESVPATLLPRSLFPSLDVAIQE
        M+SF IGRKLWR+VT DI KPVK                 A+  ++++  T                         EYESV A LL R+  PSLD  +QE
Subjt:  MKSFFIGRKLWRVVTEDILKPVKG----------------ASKEEVLMGLT------------------------FEYESVPATLLPRSLFPSLDVAIQE

Query:  ILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFS
        ILFEEKRL +I S+  DV LA  HL  + E+SF KN K HG+KF+
Subjt:  ILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFS

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-1746.27Show/hide
Query:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST
        +VLMGL  EYESV A LL R+  PSLD A+QEILFEEKRL ++ S+ SDVALA THL  + E+ F KNCK HGHKF+    +                + 
Subjt:  EVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRLNAGNVTSEVIFWTIFYST

Query:  TSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS
              H    K   +  SSS+VAAAT     PS
Subjt:  TSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGCTTTTTTATTGGTCGAAAGTTATGGCGAGTTGTAACAGAAGACATCCTCAAACCTGTCAAAGGTGCTTCTAAGGAAGAGGTTCTAATGGGACTAACGTTTGA
ATATGAGTCTGTTCCTGCTACCTTGTTACCTCGTAGTCTTTTTCCATCACTTGATGTTGCGATTCAAGAGATCCTATTTGAGGAGAAAAGGCTTGACCTTATACCCTCTA
TGTCATCTGATGTTGCACTAGCAATCACTCATCTTCATACCTCAACTGAGTCATCATTCTACAAAAATTGTAAGCAACATGGTCATAAGTTTAGTCGTTTCCTAAGATTG
AATGCAGGTAATGTCACAAGTGAGGTCATATTTTGGACAATTTTCTACTCAACCACATCGTCCTCCAGGTTACACTTTCAAGTCAAAAAGCTCCTCTCTCAACCTAGTTC
TTCCTCTATTGTTGCTGCTGCCACACCATCTTTCCATCCACCAAGTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGCTTTTTTATTGGTCGAAAGTTATGGCGAGTTGTAACAGAAGACATCCTCAAACCTGTCAAAGGTGCTTCTAAGGAAGAGGTTCTAATGGGACTAACGTTTGA
ATATGAGTCTGTTCCTGCTACCTTGTTACCTCGTAGTCTTTTTCCATCACTTGATGTTGCGATTCAAGAGATCCTATTTGAGGAGAAAAGGCTTGACCTTATACCCTCTA
TGTCATCTGATGTTGCACTAGCAATCACTCATCTTCATACCTCAACTGAGTCATCATTCTACAAAAATTGTAAGCAACATGGTCATAAGTTTAGTCGTTTCCTAAGATTG
AATGCAGGTAATGTCACAAGTGAGGTCATATTTTGGACAATTTTCTACTCAACCACATCGTCCTCCAGGTTACACTTTCAAGTCAAAAAGCTCCTCTCTCAACCTAGTTC
TTCCTCTATTGTTGCTGCTGCCACACCATCTTTCCATCCACCAAGTTTTTAG
Protein sequenceShow/hide protein sequence
MKSFFIGRKLWRVVTEDILKPVKGASKEEVLMGLTFEYESVPATLLPRSLFPSLDVAIQEILFEEKRLDLIPSMSSDVALAITHLHTSTESSFYKNCKQHGHKFSRFLRL
NAGNVTSEVIFWTIFYSTTSSSRLHFQVKKLLSQPSSSSIVAAATPSFHPPSF