; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007567 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007567
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:11922529..11923056
RNA-Seq ExpressionPI0007567
SyntenyPI0007567
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]1.6e-3563.71Show/hide
Query:  SYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTE
        SYNQI  TL+S+  NNEEWD+D F S RGGR ++EEGLD+NV+V  QGQMTAM+NLL+ MV  QVNAASSS Q V QVD++GC+   +P+  DACPLN E
Subjt:  SYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTE

Query:  TVAYIRNDPYSNKYNSGLKNHPNF
         VAY+++DPYSN YN   +NHPNF
Subjt:  TVAYIRNDPYSNKYNSGLKNHPNF

KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]1.3e-2451.24Show/hide
Query:  MLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACP
        ML+ SY QIK TL+++T+N++E  +DD   +   R R++ G+D+NV+VALQGQ+T M  LL+SM +SQV+A  + +Q V QVD+M  VGC  P+ TDAC 
Subjt:  MLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACP

Query:  LNTETVAYIRNDPYSNKYNSG
        LN E  AY+++ PYSN YN+G
Subjt:  LNTETVAYIRNDPYSNKYNSG

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]7.1e-4457.96Show/hide
Query:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSR------RGGRERSEEGLDKNVVVALQGQMTA
        M+K CPH+ IPEC+LME FYFGL+K T Q+ N VF GGML+ SYNQIK  L++M SN++EW ++ FGSR      +G R R E+G+D +++VALQGQ+  
Subjt:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSR------RGGRERSEEGLDKNVVVALQGQMTA

Query:  MDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDP
        M N+L+SM + QVN   SS+Q+V QV++MGCVGC  P+NT+ACPLNTE VAY++NDP
Subjt:  MDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDP

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]7.4e-2562.64Show/hide
Query:  VVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDPYSNKYNSGLKNHPNFGWGGTGQQN
        +VALQGQ+T M  LL+SMV++QVN  SSS+ VV  V +M CVGCS  YNTD CP NT+ + Y +NDPYSN YN G +NH NF WGGTGQ N
Subjt:  VVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDPYSNKYNSGLKNHPNFGWGGTGQQN

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]5.6e-3363.64Show/hide
Query:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLK
        ++KACP + IPEC+ MEVFYFGL+K T Q  N +FVGGML+ SYNQIKATL+SM++N++EWD+  FGSR  G  R++EGLDK+VVV LQGQM AM+NLL+
Subjt:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLK

Query:  SMVISQVNAASSSIQVVNQVD
        SM +SQVNAA++ I  V QV+
Subjt:  SMVISQVNAASSSIQVVNQVD

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein2.7e-3363.64Show/hide
Query:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLK
        ++KACP + IPEC+ MEVFYFGL+K T Q  N +FVGGML+ SYNQIKATL+SM++N++EWD+  FGSR  G  R++EGLDK+VVV LQGQM AM+NLL+
Subjt:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLK

Query:  SMVISQVNAASSSIQVVNQVD
        SM +SQVNAA++ I  V QV+
Subjt:  SMVISQVNAASSSIQVVNQVD

A0A5A7UTC1 Uncharacterized protein3.6e-2562.64Show/hide
Query:  VVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDPYSNKYNSGLKNHPNFGWGGTGQQN
        +VALQGQ+T M  LL+SMV++QVN  SSS+ VV  V +M CVGCS  YNTD CP NT+ + Y +NDPYSN YN G +NH NF WGGTGQ N
Subjt:  VVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDPYSNKYNSGLKNHPNFGWGGTGQQN

A0A5D3CC26 Uncharacterized protein3.4e-4457.96Show/hide
Query:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSR------RGGRERSEEGLDKNVVVALQGQMTA
        M+K CPH+ IPEC+LME FYFGL+K T Q+ N VF GGML+ SYNQIK  L++M SN++EW ++ FGSR      +G R R E+G+D +++VALQGQ+  
Subjt:  MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSR------RGGRERSEEGLDKNVVVALQGQMTA

Query:  MDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDP
        M N+L+SM + QVN   SS+Q+V QV++MGCVGC  P+NT+ACPLNTE VAY++NDP
Subjt:  MDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDP

A0A5D3CSC7 Uncharacterized protein7.7e-3663.71Show/hide
Query:  SYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTE
        SYNQI  TL+S+  NNEEWD+D F S RGGR ++EEGLD+NV+V  QGQMTAM+NLL+ MV  QVNAASSS Q V QVD++GC+   +P+  DACPLN E
Subjt:  SYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACPLNTE

Query:  TVAYIRNDPYSNKYNSGLKNHPNF
         VAY+++DPYSN YN   +NHPNF
Subjt:  TVAYIRNDPYSNKYNSGLKNHPNF

A0A5D3D2S0 Uncharacterized protein6.1e-2551.24Show/hide
Query:  MLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACP
        ML+ SY QIK TL+++T+N++E  +DD   +   R R++ G+D+NV+VALQGQ+T M  LL+SM +SQV+A  + +Q V QVD+M  VGC  P+ TDAC 
Subjt:  MLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAASSSIQVVNQVDDMGCVGCSNPYNTDACP

Query:  LNTETVAYIRNDPYSNKYNSG
        LN E  AY+++ PYSN YN+G
Subjt:  LNTETVAYIRNDPYSNKYNSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAAGCATGCCCTCACAATGACATTCCTGAATGCATATTGATGGAGGTGTTTTATTTTGGACTGAATAAGAGAACACAACAAACTACTAACGCTGTGTTTGTAGG
GGGAATGCTGAAGAGGTCCTACAACCAGATAAAGGCGACGTTAAACTCTATGACCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGTTCTCGTAGAGGAGGAAGAG
AAAGAAGTGAGGAAGGATTGGATAAGAACGTTGTGGTAGCGTTACAAGGCCAGATGACTGCGATGGACAATTTGCTAAAATCGATGGTGATTTCGCAAGTTAACGCTGCG
AGTAGCTCAATTCAGGTGGTGAATCAGGTGGACGATATGGGATGTGTGGGATGCAGCAATCCTTACAACACTGACGCATGTCCACTTAATACAGAAACTGTCGCGTACAT
CAGGAATGACCCCTACTCGAACAAATACAACTCTGGTTTGAAAAACCACCCTAATTTTGGGTGGGGAGGAACAGGTCAACAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAAGCATGCCCTCACAATGACATTCCTGAATGCATATTGATGGAGGTGTTTTATTTTGGACTGAATAAGAGAACACAACAAACTACTAACGCTGTGTTTGTAGG
GGGAATGCTGAAGAGGTCCTACAACCAGATAAAGGCGACGTTAAACTCTATGACCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGTTCTCGTAGAGGAGGAAGAG
AAAGAAGTGAGGAAGGATTGGATAAGAACGTTGTGGTAGCGTTACAAGGCCAGATGACTGCGATGGACAATTTGCTAAAATCGATGGTGATTTCGCAAGTTAACGCTGCG
AGTAGCTCAATTCAGGTGGTGAATCAGGTGGACGATATGGGATGTGTGGGATGCAGCAATCCTTACAACACTGACGCATGTCCACTTAATACAGAAACTGTCGCGTACAT
CAGGAATGACCCCTACTCGAACAAATACAACTCTGGTTTGAAAAACCACCCTAATTTTGGGTGGGGAGGAACAGGTCAACAAAATTAA
Protein sequenceShow/hide protein sequence
MLKACPHNDIPECILMEVFYFGLNKRTQQTTNAVFVGGMLKRSYNQIKATLNSMTSNNEEWDEDDFGSRRGGRERSEEGLDKNVVVALQGQMTAMDNLLKSMVISQVNAA
SSSIQVVNQVDDMGCVGCSNPYNTDACPLNTETVAYIRNDPYSNKYNSGLKNHPNFGWGGTGQQN