CuGenDBv2

Gene ID	PI0007573
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	D-ribose-binding periplasmic protein
Genome location	chr12:2325146..2326071
RNA-Seq Expression	PI0007573
Synteny	PI0007573
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152463.1 uncharacterized protein LOC101220404 [Cucumis sativus]

5.2e-88

96.59

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQ+ETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLKAKQEAKKKRNLL+FEGK  NSE GSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

XP_008438114.1 PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo]

1.4e-88

97.16

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQ+ETTSTHHRRRDN+TQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLKAKQEAKKKRNLLDFEGKQ NSE GSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

XP_023000947.1 uncharacterized protein LOC111495231 [Cucurbita maxima]

1.8e-69

82.29

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C +++T+   RRRD D QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        TNQDVLQGLKAKQEAK KRN LDFEGK  N E GSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

XP_023519579.1 uncharacterized protein LOC111782953 [Cucurbita pepo subsp. pepo]

3.1e-69

82.29

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C +++T+   RRRD+D QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        TNQDVLQGLKAKQEAK KRN LDFEGK  N E GSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

XP_038894996.1 uncharacterized protein LOC120083345 [Benincasa hispida]

8.0e-73

84.66

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTK+C +ETT+ HHRRRDN TQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLK KQEAK K        KQ N + GSEGEI++GMK ERN VKKC+STVS AAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LU27 Uncharacterized protein

2.5e-88

96.59

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQ+ETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLKAKQEAKKKRNLL+FEGK  NSE GSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

A0A1S3AV95 uncharacterized protein LOC103483316

6.6e-89

97.16

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQ+ETTSTHHRRRDN+TQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLKAKQEAKKKRNLLDFEGKQ NSE GSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

A0A5D3BH89 Uncharacterized protein

6.6e-89

97.16

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQ+ETTSTHHRRRDN+TQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T QDVLQGLKAKQEAKKKRNLLDFEGKQ NSE GSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

A0A6J1E7K0 uncharacterized protein LOC111431455

2.6e-69

81.71

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C +++T+   RRRD+D QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        TNQDVLQGLKAKQEAK KRN +DFEGK  N E GSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

A0A6J1KF34 uncharacterized protein LOC111495231

8.9e-70

82.29

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAIDTASLIIQHPNGKVDR YWPVNAGEIMK+NPGHYVALLISTK+C +++T+   RRRD D QTN+TNFNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        TNQDVLQGLKAKQEAK KRN LDFEGK  N E GSEGE+NQGMK E+NR       VS+AAKSRGWQPSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10530.1 unknown protein

8.6e-25

38.86

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA++ A L++QHP G +DR Y  V+  E+M   PGHYV+L+I   + + E  +     + +D +       +VR TR++LL+PT++LVLG  YRL+
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        T+Q+V++ L+ K+ AK K++ ++   K   ++  S+ ++ +  + ++ RV + NST  +  KS+ W+PSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

AT1G60010.1 unknown protein

3.1e-30

43.65

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D A+L++QHP+GK+DR Y PV+  EIM+  PGHYV+L+I         T+T        T  + +    VR TR+KLL+PT++LVLG  YRL+
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDF--EGKQWNSEN--GSEGEINQGM--KNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        T+Q+V++ L+AK+ AK K++  +   E K+ +SE     E + NQ +  K+E+ R    N   S +++S+ W+PSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDF--EGKQWNSEN--GSEGEINQGM--KNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

AT5G50090.1 unknown protein

1.5e-29

43.18

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTA ++IQHPNGK ++L  PV+A  +MK NPGH V+LLIST                  +  +S +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T ++V++GL AK+ +K K+     E K  + +      IN    +  ++++        +  SR WQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

AT5G50090.2 unknown protein

5.2e-30

44.07

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTA ++IQHPNGK ++L  PV+A  +MK NPGH V+LLIST                  +  +S +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGK-QWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG
        T ++V++GL AK+ +K K+     + K +      S    N+  + ER+R+            SR WQPSLQSISEG
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGK-QWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEG

AT5G62900.1 unknown protein

3.9e-25

36.81

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Query:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA + A+ +IQ P+GK  R Y  VNA E++K++PGH+VALL+S+ V                      +  S+R+TRIKLL+P+D+L+LG +YRL+
Subjt:  MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQ-------WNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE
        ++++V++G++AK+  K K+   +F   +         SE+ S+ +  + +  ++  +    +T     K R WQPSLQSISE
Subjt:  TNQDVLQGLKAKQEAKKKRNLLDFEGKQ-------WNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAATTGCCAAGCCATAGACACAGCTTCTCTAATCATCCAACACCCAAATGGAAAAGTCGACAGACTTTACTGGCCAGTAAACGCCGGTGAGATCATGAAAACAAA
TCCCGGCCACTACGTTGCTCTTCTCATCTCCACAAAAGTTTGCCAAACGGAAACCACCTCCACCCACCATCGTCGCCGTGATAACGACACCCAAACCAACAGTACAAATT
TCAACTCGGTTCGGTTGACCCGAATCAAGCTTCTGAAGCCTACCGATTCCCTCGTTCTCGGCCAAATTTACCGACTCGTCACAAACCAAGATGTTTTGCAGGGCTTGAAA
GCCAAACAGGAAGCGAAAAAGAAAAGAAATTTGTTGGATTTTGAAGGAAAACAGTGGAATTCGGAGAACGGATCTGAAGGGGAAATTAATCAGGGGATGAAGAATGAGAG
AAACAGAGTGAAGAAATGCAATTCAACAGTATCGACGGCGGCGAAATCGAGAGGGTGGCAGCCATCACTGCAGAGCATTTCTGAGGGGGAAGTTGAGGATTTGATATTTG
AGATAAAGAACATAATGATGATTCAATGA

mRNA sequence

Show/hide mRNA sequence

TTCTTCTTCTTCAACCTCGCCGCCGTAGCTTCCACTTCTTAAAGAGACAAAAAACAGAGTACCAGTAGAGAGAGAAACAAACCCGATGGGAAATTGCCAAGCCATAGACA
CAGCTTCTCTAATCATCCAACACCCAAATGGAAAAGTCGACAGACTTTACTGGCCAGTAAACGCCGGTGAGATCATGAAAACAAATCCCGGCCACTACGTTGCTCTTCTC
ATCTCCACAAAAGTTTGCCAAACGGAAACCACCTCCACCCACCATCGTCGCCGTGATAACGACACCCAAACCAACAGTACAAATTTCAACTCGGTTCGGTTGACCCGAAT
CAAGCTTCTGAAGCCTACCGATTCCCTCGTTCTCGGCCAAATTTACCGACTCGTCACAAACCAAGATGTTTTGCAGGGCTTGAAAGCCAAACAGGAAGCGAAAAAGAAAA
GAAATTTGTTGGATTTTGAAGGAAAACAGTGGAATTCGGAGAACGGATCTGAAGGGGAAATTAATCAGGGGATGAAGAATGAGAGAAACAGAGTGAAGAAATGCAATTCA
ACAGTATCGACGGCGGCGAAATCGAGAGGGTGGCAGCCATCACTGCAGAGCATTTCTGAGGGGGAAGTTGAGGATTTGATATTTGAGATAAAGAACATAATGATGATTCA
ATGAACACAAATTTGTGGGGTTTTTTTTAGGAGTTTTAGAGTGAGATTTGTGCATAAGGAAATGAGTAGTTAATTACAGAAACAGAACAGAACAG

Protein sequence

Show/hide protein sequence

MGNCQAIDTASLIIQHPNGKVDRLYWPVNAGEIMKTNPGHYVALLISTKVCQTETTSTHHRRRDNDTQTNSTNFNSVRLTRIKLLKPTDSLVLGQIYRLVTNQDVLQGLK
AKQEAKKKRNLLDFEGKQWNSENGSEGEINQGMKNERNRVKKCNSTVSTAAKSRGWQPSLQSISEGEVEDLIFEIKNIMMIQ

PI0007573 (gene) of Melon (PI 482460) v1 genome