; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007585 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007585
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:9402700..9403319
RNA-Seq ExpressionPI0007585
SyntenyPI0007585
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]9.8e-6174.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNLRWGN+N++ TQA  TS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-6073.38Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+N++ TQA STS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKL AQ ++ANVSA+SLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.7e-6074.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGN+N++ TQA STS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ +MKQQM+QL  AISK++GKGKLPAQPDHANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.8e-6174.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP+++E+ N++R+YDPHGNTYN GWRD PNLRWGN+ +  TQA STS+NQG+NLED++KA  TNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKLPAQPDHANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]4.9e-6072.73Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNLRWGN+N++ TQA  TS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ +MKQQM+QL   ISK++GKGKLPAQPDH NVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032912.4e-6072.73Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNLRWGN+N++ TQA  TS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ +MKQQM+QL   ISK++GKGKLPAQPDH NVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
A0A5D3CB46 Retrotransposon gag protein1.8e-6074.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGN+N++ TQA STS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ +MKQQM+QL  AISK++GKGKLPAQPDHANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
A0A5D3CFE7 Retrotransposon gag protein4.7e-6174.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG   KV KCGVCGL+GHPNDKCP+++E+ N++R+YDPHGNTYN GWRD PNLRWGN+ +  TQA STS+NQG+NLED++KA  TNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKLPAQPDHANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
A0A5D3CRR8 Retrotransposon gag protein1.1e-6073.38Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+N++ TQA STS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKL AQ ++ANVSA+SLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
E5GBZ4 Retrotransposon gag protein4.7e-6174.03Show/hide
Query:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI
        MLNMTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNLRWGN+N++ TQA  TS+NQG+NLED++KA ATNT+
Subjt:  MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTI

Query:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
         FQ EMKQQM+QL  AISK++GKGKLPAQPD+ANVSAISLRSGKIL  P ++EK
Subjt:  FFQNEMKQQMSQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCTAATGATAAGTGCCCTGA
CCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAATGCCGGTTGGAGAGACAATCCCAACCTTAGATGGGGAAATAATAATGAACAAC
CCACACAAGCAACTTCTACTTCAAACAATCAAGGTAGTAATTTGGAGGATTTGGTAAAAGCTTTTGCCACTAATACAATTTTTTTTCAAAATGAAATGAAGCAACAAATG
TCTCAATTAAAAAATGCAATAAGCAAGTTGGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCA
ACCTCCTCCAAGTGAAGAAAAGATTAGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAATATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCTAATGATAAGTGCCCTGA
CCTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAATGCCGGTTGGAGAGACAATCCCAACCTTAGATGGGGAAATAATAATGAACAAC
CCACACAAGCAACTTCTACTTCAAACAATCAAGGTAGTAATTTGGAGGATTTGGTAAAAGCTTTTGCCACTAATACAATTTTTTTTCAAAATGAAATGAAGCAACAAATG
TCTCAATTAAAAAATGCAATAAGCAAGTTGGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGCA
ACCTCCTCCAAGTGAAGAAAAGATTAGTTCCTAA
Protein sequenceShow/hide protein sequence
MLNMTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNEQPTQATSTSNNQGSNLEDLVKAFATNTIFFQNEMKQQM
SQLKNAISKLEGKGKLPAQPDHANVSAISLRSGKILQPPPSEEKISS