; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007635 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007635
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF4228 domain-containing protein
Genome locationchr12:5603533..5604744
RNA-Seq ExpressionPI0007635
SyntenyPI0007635
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019577.1 hypothetical protein SDJN02_18538, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-7177.5Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSSAA  D ASALPKIVIVPPEADLQRGKIYFLMPLP +PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP

Query:  R-----RRKKR----EYSNNHH--RTTAAATASAVS-----------NTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR       NNHH  RT  AA ++A S           N N+ISM+NLLVSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPSD+
Subjt:  R-----RRKKR----EYSNNHH--RTTAAATASAVS-----------NTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

KGN65978.2 hypothetical protein Csa_019723 [Cucumis sativus]3.1e-8795.56Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLP DPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHR TTAA+TASAV  + TN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_004150211.1 uncharacterized protein LOC101205379 [Cucumis sativus]3.1e-8795.56Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLP DPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHR TTAA+TASAV  + TN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_008443296.1 PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo]6.4e-8592.9Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLP DPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP

Query:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T A+TASAV    +N NNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

XP_038894960.1 uncharacterized protein LOC120083324 [Benincasa hispida]4.9e-7786.41Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PRDPD
        MKNSIRCCISCILPCG LDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP SSAAHDAA+A PKIVIVPPEADLQRGKIYFLMPL   P +PD
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PRDPD

Query:  KPRRRKKREYSNN----HHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        KPRRRKKR+ +NN     HRTTAA +A+  +N NNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  KPRRRKKREYSNN----HHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

TrEMBL top hitse value%identityAlignment
A0A0A0M094 Uncharacterized protein1.5e-8795.56Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLP DPDKPR
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRKKREYSNNHHR TTAA+TASAV  + TN+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRKKREYSNNHHR-TTAAATASAV--SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A1S3B8G2 uncharacterized protein LOC1034869133.1e-8592.9Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLP DPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP

Query:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T A+TASAV    +N NNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A5A7UMG1 DUF4228 domain-containing protein3.1e-8592.9Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP
        MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP SSSAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPLP DPDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSP-SSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP

Query:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        RRRKKRE+SNNHHRT T A+TASAV    +N NNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
Subjt:  RRRKKREYSNNHHRT-TAAATASAV----SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6J1KLR7 rhoGEF domain-containing protein gxcI-like1.1e-6976.88Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP
        M+NSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSPSSSAA  D ASALPKIVIVPPEADLQRGKIYFLMPLP +PDKP
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAA-HDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKP

Query:  R-----RRKKR----EYSNNHH--RTTAAATASAV----------SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI
        R     RRKKR       NNHH  RT  AA ASA           +N ++ISM+NL VSD YLSEILS+KASTHRERRRGRVGVWRPHL+SICESPS +
Subjt:  R-----RRKKR----EYSNNHH--RTTAAATASAV----------SNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

A0A6P5WYR0 ELMO domain-containing protein F-like2.7e-5764.71Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        MKN+IRCCISCILPCGALDVIRI+HSNG VEEI+GSIKAS++MKAHPKHVLKKPSSPS          +PKIVIVPP+A+LQRGKIYFLMP+P  P+K R
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  -------RRKKRE----YSNNHHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD
               ++K+R+     +NN+  + + + ++A  N N ISMTNLL+SD YLSEILS+K ST R+RRRGRVGVWRPHL+SI E+P+D
Subjt:  -------RRKKRE----YSNNHHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein3.1e-2943.33Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        M NS+RCC++C+LPCGALD+IRIVH NGYVEEIT SI A ++++A+P HVL KP S            + KI+I+ PE++L+RG IYFL+P    P+K R
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  RRK--KREYSNNHHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE
        RRK   R   N  + +  AA      +   + +      + YL E++S  ++   HR RRR      V  WRP L SI E
Subjt:  RRK--KREYSNNHHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSICE

AT1G29195.1 unknown protein4.3e-4756.38Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDP----
        MK +IRCCI+CILPCGALDVIRIVHSNG+VEEI+G+I AS++MKAHPKHVLKKPSSP+S        +  KIVIVPPEA+LQRGKIYFLMP  +      
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDP----

Query:  -DKPRRR--------KKREYSNNHHRTTAAATASAVSN---TNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE
          K RR         KKR      HR          SN     N     L+ SD YL+EILS+K +T ++RR+GRVGVWRPHL+SI E
Subjt:  -DKPRRR--------KKREYSNNHHRTTAAATASAVSN---TNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE

AT2G30230.1 unknown protein1.7e-2739.34Show/hide
Query:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR
        M NS+RCC++C+LPCGALD+IRIVH NG+V+EIT  + A ++++A+P HVL KP S            + KI+I+ PE++L+RG IYFL+P    P+K +
Subjt:  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPR

Query:  RRKKREYSNNHHRTTAA--ATASAVSNTNNISMTNLLVSDHYLSEI-LSDKAST------HRER--RRGRVGVWRPHLQSICE
         +K++E         +     +  VS   ++    L + + YL ++ LS+K S+      HR +  R   V  WRPHL SI E
Subjt:  RRKKREYSNNHHRTTAA--ATASAVSNTNNISMTNLLVSDHYLSEI-LSDKAST------HRER--RRGRVGVWRPHLQSICE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCTTGTGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACCGGCTCCAT
CAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCTTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAAGATCGTCA
TCGTCCCACCCGAAGCTGACCTCCAACGCGGCAAGATTTATTTCCTCATGCCACTCCCTCGCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATTCCAATAAT
CATCATCGAACAACCGCCGCCGCCACCGCCTCTGCTGTATCCAACACCAACAACATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAATACTCTCCGA
CAAAGCTTCCACCCACCGTGAACGGCGGCGCGGTCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAATAAAAAACAAAAACCAAATAAAAGAAGAATGAAGAAAAAAGGAAAAAAACGAAGGGAAGAAGAAAATGAAGGAGAAGTACTTTCTCTCTCTCGATCTCTCTCCCT
TCTCTTTTCCTCTCCCATATTTCATTTCATTAATCTCTCTCTCCTCCAATAGACAAAACAAACTCAAAAATTAAATTAAAAATTTTCTTTCTTTTCTTTTTTTTTTTTTT
TTAAGGCAATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCTTGTGGAGCTCTTGATGTAATTCGCATAGTCCACTCCAATGGCTACGTCGAAGAAATCACC
GGCTCCATCAAAGCTTCCGATGTCATGAAAGCCCATCCTAAACACGTCCTTAAAAAGCCTTCCTCCCCTTCCTCCTCCGCCGCTCACGACGCCGCCTCTGCCCTCCCCAA
GATCGTCATCGTCCCACCCGAAGCTGACCTCCAACGCGGCAAGATTTATTTCCTCATGCCACTCCCTCGCGACCCCGACAAGCCCCGCCGAAGAAAGAAGAGAGAATATT
CCAATAATCATCATCGAACAACCGCCGCCGCCACCGCCTCTGCTGTATCCAACACCAACAACATTTCCATGACTAATCTCCTCGTTTCCGATCACTACCTCTCCGAAATA
CTCTCCGACAAAGCTTCCACCCACCGTGAACGGCGGCGCGGTCGTGTCGGTGTCTGGAGACCTCACTTACAAAGCATTTGTGAATCACCCAGTGATATCTAAAAAAAAAC
CGGCTATTCAGGTTGTGGGTCTTTTTTCCTTTTTTTTAAACATAAATATATATATATATCATCATAATTAAATTCCATTTCTTCTACATATCATGATCATTCATAAATAA
TTTTTAAAAAAAAAAATCTTTTTTTTTTCTAGAGGGATCTGAAATTAATTAAGAATTAATGTGGTAATTAAATCTAATTAGTTACTGATTTATGCTTAATTAATTTCCAG
ATTATTTTTTTCTTTAATTTGTGGAGAAATTTGAGTGCTTGTAGAGAGAGAATTCATGTGTGTATGTGCATGAACATAATTTTGAGTGATTGTGATATGATGATATGATT
GTACAGCCTCCAATAATCTACTTTCTTTTCTTTTCCCCATTTTTTATCCCATCATTTTTTCTTTCTTTTTTTTTTTACTTCTTACATTTTCTATTATTTTATATAATTCA
AC
Protein sequenceShow/hide protein sequence
MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSSAAHDAASALPKIVIVPPEADLQRGKIYFLMPLPRDPDKPRRRKKREYSNN
HHRTTAAATASAVSNTNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI