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PI0007651 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007651
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:12646567..12647877
RNA-Seq ExpressionPI0007651
SyntenyPI0007651
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-5656.78Show/hide
Query:  MAPQLRHANDHLLPGRAQGSR---RFIAT--------------------------------------------------------GASIQQFDQDVTQEY
        +APQL HAN+HLLPGRA GSR   +F  T                                                        G SIQQFD DVTQEY
Subjt:  MAPQLRHANDHLLPGRAQGSR---RFIAT--------------------------------------------------------GASIQQFDQDVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNVEEVPLVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RL DVADDPQQVL+ICNNN+RYMEEIH MYDL+        G V  E  +LDEVYHNVEEVP  TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNVEEVPLVTQTQSQTGY

Query:  GSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        GSPM MM  FGAGY DSEV  GY D+G+ PSS YMD
Subjt:  GSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.8e-4959.7Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT---------GDVFEWKKLDEVY
        +A G SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RL DVADDPQQVLDICNNN RYMEEIH MY+++             E  +LDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT---------GDVFEWKKLDEVY

Query:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMDADQQLLTCMDMDTDEAAENITNICTMKHLQTFQFHESTNKNQRIKK
        HNVEEVP  TQTQSQT YGS M MM  FG G+             +    ++M    QLLTC  MDTD A  NI NIC MKHLQ +Q  +STNKNQR K+
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMDADQQLLTCMDMDTDEAAENITNICTMKHLQTFQFHESTNKNQRIKK

Query:  S
        +
Subjt:  S

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.6e-5173.38Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDL--------TGDV-FEWKKLDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RL DVADD QQ LDICNNNERYMEEIH MYDL         G V  E  +LD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDL--------TGDV-FEWKKLDEVY

Query:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        HNVEEVP  TQTQSQTGYGSPM MM  F AGYCD EV IGY D+GV PSSSY+D
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.9e-5576.82Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RL DVADDPQQVL+ICNNN+RYMEEIH MYDL+        G V  E  +LDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNV

Query:  EEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        EEVP  TQTQSQTGYGSPM MM  FGAGY DSEV  GY D+G+ PSS YMD
Subjt:  EEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.2e-5373.25Show/hide
Query:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT-------GDVF--EWKKLD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RL DV +DPQQVLDICNNNERYME+IH +YDL         + F  E  +LD
Subjt:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT-------GDVF--EWKKLD

Query:  EVYHNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        EVYHNVEEVP  TQTQSQTGYGSPM MM  FGAGYCDSEV IGY D+ V P SSYMD
Subjt:  EVYHNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-5756.78Show/hide
Query:  MAPQLRHANDHLLPGRAQGSR---RFIAT--------------------------------------------------------GASIQQFDQDVTQEY
        +APQL HAN+HLLPGRA GSR   +F  T                                                        G SIQQFD DVTQEY
Subjt:  MAPQLRHANDHLLPGRAQGSR---RFIAT--------------------------------------------------------GASIQQFDQDVTQEY

Query:  IHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNVEEVPLVTQTQSQTGY
        IHWYNNITRLYITRP AAVGHLRSNN RL DVADDPQQVL+ICNNN+RYMEEIH MYDL+        G V  E  +LDEVYHNVEEVP  TQTQSQTGY
Subjt:  IHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNVEEVPLVTQTQSQTGY

Query:  GSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        GSPM MM  FGAGY DSEV  GY D+G+ PSS YMD
Subjt:  GSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.7e-5173.38Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDL--------TGDV-FEWKKLDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RL DVADD QQ LDICNNNERYMEEIH MYDL         G V  E  +LD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDL--------TGDV-FEWKKLDEVY

Query:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        HNVEEVP  TQTQSQTGYGSPM MM  F AGYCD EV IGY D+GV PSSSY+D
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.8e-5059.7Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT---------GDVFEWKKLDEVY
        +A G SIQQFD DVTQEYIHWYNNITRLYITR GA    +RSNN RL DVADDPQQVLDICNNN RYMEEIH MY+++             E  +LDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT---------GDVFEWKKLDEVY

Query:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMDADQQLLTCMDMDTDEAAENITNICTMKHLQTFQFHESTNKNQRIKK
        HNVEEVP  TQTQSQT YGS M MM  FG G+             +    ++M    QLLTC  MDTD A  NI NIC MKHLQ +Q  +STNKNQR K+
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMDADQQLLTCMDMDTDEAAENITNICTMKHLQTFQFHESTNKNQRIKK

Query:  S
        +
Subjt:  S

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-5576.82Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RL DVADDPQQVL+ICNNN+RYMEEIH MYDL+        G V  E  +LDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT--------GDV-FEWKKLDEVYHNV

Query:  EEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        EEVP  TQTQSQTGYGSPM MM  FGAGY DSEV  GY D+G+ PSS YMD
Subjt:  EEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein5.9e-5473.25Show/hide
Query:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT-------GDVF--EWKKLD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RL DV +DPQQVLDICNNNERYME+IH +YDL         + F  E  +LD
Subjt:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLT-------GDVF--EWKKLD

Query:  EVYHNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD
        EVYHNVEEVP  TQTQSQTGYGSPM MM  FGAGYCDSEV IGY D+ V P SSYMD
Subjt:  EVYHNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACAAGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTTGTGATGTTG
CAGATGATCCGCAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAAGAGATACATTATATGTACGATTTAACAGGGGACGTGTTCGAGTGGAAGAAACTC
GATGAAGTTTACCATAACGTAGAAGAAGTACCTCTAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGTCAGCTTTTGGAGCAGGATATTG
TGATTCTGAGGTCGATATAGGATATAATGACTCAGGGGTCGATCCATCGTCTTCATACATGGATGCGGACCAGCAACTTCTTACATGCATGGACATGGACACGGACGAGG
CCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAAACATTCCAGTTCCACGAGAGTACCAACAAGAACCAGAGAATCAAGAAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACAAGGTTCACGAAGATTCATTGCCACTGGAGCTTCGATTCAACAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTTGTGATGTTG
CAGATGATCCGCAACAAGTTCTTGATATATGTAATAATAATGAGAGGTACATGGAAGAGATACATTATATGTACGATTTAACAGGGGACGTGTTCGAGTGGAAGAAACTC
GATGAAGTTTACCATAACGTAGAAGAAGTACCTCTAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGTCAGCTTTTGGAGCAGGATATTG
TGATTCTGAGGTCGATATAGGATATAATGACTCAGGGGTCGATCCATCGTCTTCATACATGGATGCGGACCAGCAACTTCTTACATGCATGGACATGGACACGGACGAGG
CCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAAACATTCCAGTTCCACGAGAGTACCAACAAGAACCAGAGAATCAAGAAGAGCTAG
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPGRAQGSRRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLCDVADDPQQVLDICNNNERYMEEIHYMYDLTGDVFEWKKL
DEVYHNVEEVPLVTQTQSQTGYGSPMMMMSAFGAGYCDSEVDIGYNDSGVDPSSSYMDADQQLLTCMDMDTDEAAENITNICTMKHLQTFQFHESTNKNQRIKKS