CuGenDBv2

Gene ID	PI0007664
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	LEA_2 domain-containing protein
Genome location	chr12:19644361..19646368
RNA-Seq Expression	PI0007664
Synteny	PI0007664
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008462337.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]

1.7e-48

66.45

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE
        M+ICWLVV PK PR +VETGKVIAH+ST +MLNATIAFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P F       T+  P+   + +YPFG+ E
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPEL FSAE+SYSV  W S+PRLL+IYCN+LLL+IND+ TF+NTKC VDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

XP_008462348.1 PREDICTED: protein YLS9-like [Cucumis melo]

6.3e-67

88.16

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE
        MIICWLVVIPKTPRLIVETGKV+ HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLT  +          + EYPFGYTE
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPELQFSAEVSYSVE+WMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

XP_011654134.1 NDR1/HIN1-like protein 10 isoform X2 [Cucumis sativus]

2.7e-65

86.09

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE
        MIICWLVVIPK+PRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLT  +          + EYPFGYTE
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVD
        EINPELQFSAEVSYS+++WMSKPRLLEIYCNH+LLKINDST FDNTKCKVD
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVD

XP_038895359.1 NDR1/HIN1-like protein 10 [Benincasa hispida]

2.0e-52

72.37

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE
        +IICWLVV+PKTPRLIVETG VI HSST +ML ATI FT +SYNPNKRA+IHM  MRMIV+++G RF S IPSFTLT  +          + EYPFG+ E
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EI+PEL+FSAEVSYS+  WMSKPRLLEIYCNHLLLKIN STTFDNTKCKVDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

XP_038895526.1 NDR1/HIN1-like protein 26 isoform X1 [Benincasa hispida]

1.0e-48

69.28

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPSHL-----------EYPFGYT
        +I CW+VV PKTPR +VETG+VIA SST +MLNATIA+TVKSYNPNKRASIHMD MRMIV NMG  FSS IP+FT  +P +L           EYPFG+ 
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPSHL-----------EYPFGYT

Query:  EEINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EEI+P L+F A+VSYSVERWMSKPRLLEIYC+ L L INDS TF+NT+CKVDL
Subjt:  EEINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVK9 LEA_2 domain-containing protein

3.2e-48

65.79

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE
        M+ICWLVV PK PR+ VETG+VIAH+ST +MLNATI FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F       T+  P+   + +YPFG+ E
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPEL FSAE+SYSVE W S+PRLL IYCN+LLL+IND+ TF+NTKC VDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

A0A0A0LY09 Uncharacterized protein

1.3e-65

86.09

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE
        MIICWLVVIPK+PRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLT  +          + EYPFGYTE
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVD
        EINPELQFSAEVSYS+++WMSKPRLLEIYCNH+LLKINDST FDNTKCKVD
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVD

A0A1S3CGR5 NDR1/HIN1-like protein 12

8.4e-49

66.45

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE
        M+ICWLVV PK PR +VETGKVIAH+ST +MLNATIAFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P F       T+  P+   + +YPFG+ E
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPEL FSAE+SYSV  W S+PRLL+IYCN+LLL+IND+ TF+NTKC VDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

A0A1S3CGS4 protein YLS9-like

3.1e-67

88.16

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE
        MIICWLVVIPKTPRLIVETGKV+ HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLT  +          + EYPFGYTE
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPS----------HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPELQFSAEVSYSVE+WMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

A0A5A7TF76 NDR1/HIN1-like protein 12

8.4e-49

66.45

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Query:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE
        M+ICWLVV PK PR +VETGKVIAH+ST +MLNATIAFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P F       T+  P+   + +YPFG+ E
Subjt:  MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSF-------TLTRPS---HLEYPFGYTE

Query:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
        EINPEL FSAE+SYSV  W S+PRLL+IYCN+LLL+IND+ TF+NTKC VDL
Subjt:  EINPELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

3.3e-05

23.53

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Query:  IICWLVVIPKTPRLIVETGKVIAHSST-ISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPSHLEYPFGYTEEINP------
        +I WL   PK  R  VE   V   + T  + ++AT  FT++S+NPN R S++   + +      V+F     +F    P H   P    ++I+       
Subjt:  IICWLVVIPKTPRLIVETGKVIAHSST-ISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPSHLEYPFGYTEEINP------

Query:  ----------------------ELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL
                              E+   A V + V  W S  R  +I C+H+ + ++      N+ C  D+
Subjt:  ----------------------ELQFSAEVSYSVERWMSKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

Sequences

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CDS sequence

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ATGATCATATGTTGGCTTGTTGTCATCCCCAAAACCCCACGTCTCATTGTGGAAACTGGCAAAGTCATAGCCCATAGTTCAACTATTAGTATGCTCAATGCTACCATAGC
TTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATTGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCT
TCACGCTCACCCGTCCAAGTCACCTTGAATACCCTTTTGGGTACACGGAAGAGATAAATCCAGAACTTCAATTCTCAGCTGAAGTCAGTTATAGTGTGGAGAGATGGATG
TCAAAACCTCGATTGCTTGAGATCTATTGTAATCACCTCTTGCTTAAAATCAATGATTCAACGACGTTTGATAATACCAAATGCAAAGTGGATCTTTGA

mRNA sequence

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Protein sequence

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MIICWLVVIPKTPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTRPSHLEYPFGYTEEINPELQFSAEVSYSVERWM
SKPRLLEIYCNHLLLKINDSTTFDNTKCKVDL

PI0007664 (gene) of Melon (PI 482460) v1 genome