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PI0007677 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007677
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description40S ribosomal protein S23-1
Genome locationchr05:4210812..4213863
RNA-Seq ExpressionPI0007677
SyntenyPI0007677
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]1.1e-4489.9Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR+ GFSDGE+MRSDA PC QLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD  KVVR
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]1.6e-4590.91Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR FGFSDGE+MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  +  R
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]5.6e-4691.92Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR FGFSDGE+MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K  R
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]1.3e-4590.91Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR FGFSDG++MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K  R
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]7.3e-4691.92Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  KVV+
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939378.7e-4590.72Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKV
        MALRRL GFSDGEIMRSDAKPCSQLMKQTAGLC+VEG L FW+LCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K+
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKV

A0A5D3BBN9 40S ribosomal protein S23-18.7e-4590.72Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKV
        MALRRL GFSDGEIMRSDAKPCSQLMKQTAGLC+VEG L FW+LCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K+
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKV

A0A6J1DQC3 uncharacterized protein LOC1110232545.1e-4589.9Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR+ GFSDGE+MRSDA PC QLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD  KVVR
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

A0A6J1FAF1 uncharacterized protein LOC1114438687.9e-4690.91Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR FGFSDGE+MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  +  R
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

A0A6J1I1J3 uncharacterized protein LOC1114685992.7e-4691.92Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR
        MALRR FGFSDGE+MRSDAKPCSQLMKQTAGLCTV GGLAFWILCRLHYGPRIT+PRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD  K  R
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein4.9e-4075Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK
        MALR+  G+S+G++MRSDAKPCS+LMKQTA + TV G L FW+LCRLHYGPRIT+PRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK

AT1G57540.2 unknown protein4.9e-4075Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK
        MALR+  G+S+G++MRSDAKPCS+LMKQTA + TV G L FW+LCRLHYGPRIT+PRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK

AT1G57540.3 unknown protein4.9e-4075Show/hide
Query:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK
        MALR+  G+S+G++MRSDAKPCS+LMKQTA + TV G L FW+LCRLHYGPRIT+PRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Subjt:  MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGATTGTTCGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTTGAAGG
AGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAATACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGG
CTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGCAAAGTTGTAAGGTAA
mRNA sequenceShow/hide mRNA sequence
AGGGGAGGGAGCTCCACTCTCTCTTCGGTACTTCTCCTCTGAATTCAAACCTCAAATTCCTTAACCGGCGGCGGCGCGCCCCCAAAGCCTCGGTACGCCGGCGAAGACTT
GTGGTTATCGCCTCAAGCAATTGATCTGTGTTTTTTCTCGCCCCCATTTTCTTTCGGAAATTAGCAGATGGCACTTAGACGATTGTTCGGCTTTTCAGATGGTGAGATCA
TGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTTGAAGGAGGACTTGCGTTCTGGATTCTTTGTAGATTACATTATGGTCCA
AGAATTACAATACCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAA
TATAGCTGCTTATGACAATAGCAAAGTTGTAAGGTAATTGACATTTATAGATTAATAATCTTATTGTATCATTAAACAGTGTTATTCAGATGTTTCCTTATTAGCATCTA
ACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTCTTGTTGACTCTTATCAAGCTAAGGTCCATATTTAGATTGTATGTGTGGCTTCATGCTATAG
AACTAAAAAGGAGTTTTAGGCCTACCTTTGTATTTTTTTTCTCTCAATAAAAGTTAGTTTATGAGAAGAAAAAAAGCTTTTAGTCATGTAACAAAGCAAATTTTCTAATT
TTATTGAATTGGTGAATATTATGTTTA
Protein sequenceShow/hide protein sequence
MALRRLFGFSDGEIMRSDAKPCSQLMKQTAGLCTVEGGLAFWILCRLHYGPRITIPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNSKVVR