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PI0007683 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007683
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:9808209..9808673
RNA-Seq ExpressionPI0007683
SyntenyPI0007683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-5779.22Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A+NAYTGPI RSRSKGI +E DQGS +AQSILKQLMES K GI IKENPLYDN   +SS+SKKE+HPDV+SVMM D+T EAAMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK VEERDHEI ALREQ++TRET ESSQTPIVKA DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

KAA0065806.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-5676.62Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A++AYTGPI R+RSKGII+E DQGS IAQSILKQLMESPK GI IKENPLYDN + AS++SKKE+HPDV+SV+M D+T EAAMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK VEERDHEI ALREQ++TR+T ES+QTP+VKA DKGKN VQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

TYK09751.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-5676.62Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A++AYTGPI  S SKGI +E DQGS +AQSILKQLMESPKVGI IKENPLYDNF +ASS+SKKE+HPDV+ VMM D+T EAAMAKME+
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK +EE DHEI ALREQ++TRET ESSQTP+VKA DKGKNVVQ+NQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]7.1e-5677.92Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  SKSS A++ YTGPI RSRSKGII+  DQGSAIAQSILKQLMESPK GI IKENPLY+++  ASSRS KE+HPDV+SVMM DV  E AMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KIN LMKVV+ERDHEIAAL+EQ+QTRET ESSQTP+VK  DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]7.1e-5677.92Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  SKSS A++ YTGPI RSRSKGII+  DQGSAIAQSILKQLMESPK GI IKENPLY+++  ASSRS KE+HPDV+SVMM DV  E AMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KIN LMKVV+ERDHEIAAL+EQ+QTRET ESSQTP+VK  DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

TrEMBL top hitse value%identityAlignment
A0A5A7UF60 Ty3-gypsy retrotransposon protein5.9e-5676.62Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KKV S S +A++AYTGPI RSRSKGII+E DQ S + QSILKQLMESPK GI IK+NPLYDN   ASS SKK++HPDV+SVMM D+T EAAMA+ME+
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK VEERDHEI ALREQ++TRET ESSQTP+VKA DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

A0A5A7VCU1 Ty3-gypsy retrotransposon protein6.5e-5575.97Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S+SS+A++ YTGPI R+RSKGI +E DQGS + QSILKQLMESPK  I IKEN LYDN   ASS+SKK+ HPDV+SVMM D+T EA MA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMKVVEERDHEI ALREQ+QTRETVESSQT +VKA DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

A0A5D3BDK1 Ty3-gypsy retrotransposon protein1.2e-5676.62Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A++AYTGPI R+RSKGII+E DQGS IAQSILKQLMESPK GI IKENPLYDN + AS++SKKE+HPDV+SV+M D+T EAAMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK VEERDHEI ALREQ++TR+T ES+QTP+VKA DKGKN VQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.8e-5779.22Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A+NAYTGPI RSRSKGI +E DQGS +AQSILKQLMES K GI IKENPLYDN   +SS+SKKE+HPDV+SVMM D+T EAAMA+MER
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK VEERDHEI ALREQ++TRET ESSQTPIVKA DKGKNVVQENQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

A0A5D3CD35 Ty3-gypsy retrotransposon protein5.3e-5776.62Show/hide
Query:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER
        MA KK  S SS+A++AYTGPI  S SKGI +E DQGS +AQSILKQLMESPKVGI IKENPLYDNF +ASS+SKKE+HPDV+ VMM D+T EAAMAKME+
Subjt:  MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMER

Query:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ
        KINFLMK +EE DHEI ALREQ++TRET ESSQTP+VKA DKGKNVVQ+NQPQQ
Subjt:  KINFLMKVVEERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCAAAGAAAGTTACATCCAAATCTTCTATTGCAAACAACGCTTACACGGGACCTATCAATCGTAGTCGTTCAAAGGGGATCATCGAGGAACATGATCAAGGTTC
TGCCATCGCACAGAGCATCCTAAAGCAATTGATGGAGTCTCCTAAAGTTGGGATTTTCATCAAGGAAAACCCCTTGTATGATAACTTTAGTTTTGCCTCTAGTAGATCAA
AGAAGGAATCACACCCCGATGTGTTGTCTGTCATGATGGTTGATGTAACGGGTGAGGCTGCCATGGCAAAGATGGAGAGGAAAATCAATTTCCTGATGAAAGTTGTCGAG
GAGCGAGATCACGAAATCGCAGCTTTGAGAGAGCAAATACAGACTCGTGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTGGTGACAAAGGGAAGAATGTGGT
GCAAGAAAACCAACCACAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCAAAGAAAGTTACATCCAAATCTTCTATTGCAAACAACGCTTACACGGGACCTATCAATCGTAGTCGTTCAAAGGGGATCATCGAGGAACATGATCAAGGTTC
TGCCATCGCACAGAGCATCCTAAAGCAATTGATGGAGTCTCCTAAAGTTGGGATTTTCATCAAGGAAAACCCCTTGTATGATAACTTTAGTTTTGCCTCTAGTAGATCAA
AGAAGGAATCACACCCCGATGTGTTGTCTGTCATGATGGTTGATGTAACGGGTGAGGCTGCCATGGCAAAGATGGAGAGGAAAATCAATTTCCTGATGAAAGTTGTCGAG
GAGCGAGATCACGAAATCGCAGCTTTGAGAGAGCAAATACAGACTCGTGAAACTGTTGAGTCAAGTCAAACTCCTATTGTCAAAGCTGGTGACAAAGGGAAGAATGTGGT
GCAAGAAAACCAACCACAACAATAA
Protein sequenceShow/hide protein sequence
MAPKKVTSKSSIANNAYTGPINRSRSKGIIEEHDQGSAIAQSILKQLMESPKVGIFIKENPLYDNFSFASSRSKKESHPDVLSVMMVDVTGEAAMAKMERKINFLMKVVE
ERDHEIAALREQIQTRETVESSQTPIVKAGDKGKNVVQENQPQQ