; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007720 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007720
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPHD finger protein ALFIN-LIKE 1
Genome locationchr04:3977118..3980539
RNA-Seq ExpressionPI0007720
SyntenyPI0007720
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR021998 - Alfin, N-terminal
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB59013.1 PHD finger protein ALFIN-LIKE 1 [Morus notabilis]2.1e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
OAY82225.1 PHD finger protein ALFIN-LIKE 1 [Ananas comosus]2.1e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
PON92243.1 Alfin [Trema orientale]2.1e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
XP_015867965.1 PHD finger protein ALFIN-LIKE 1-like [Ziziphus jujuba]2.1e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
XP_028125546.1 PHD finger protein ALFIN-LIKE 1-like [Camellia sinensis]2.1e-1771.83Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT-ASSLPHDF
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  +DSWLLSVAFYFGARL+RN+R R F+  + LP  F
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT-ASSLPHDF
TrEMBL top hitse value%identityAlignment
A0A6J5U400 PHD-type domain-containing protein1.0e-1773.85Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASS
        AE+V  ELPEPALGINFARDGMNRK WLSL+ +H  SDSWLLSVAFYFGARL+RN+R R F+ ++
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASS
A0A6J5XW02 PHD-type domain-containing protein1.0e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
A0A7N0U5R7 PHD-type domain-containing protein3.4e-1880.65Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R FT
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
A0A7N0VG78 PHD-type domain-containing protein3.4e-1880.65Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R FT
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
M5W0X9 PHD-type domain-containing protein1.0e-1779.03Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGMNRK WLSLV +H  SDSWLLSVAFYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
SwissProt top hitse value%identityAlignment
A2Y0Q2 PHD finger protein ALFIN-LIKE 11.9e-1851.49Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRF-TASSLP--HDFVKRLTETSENEYQRITEENREKYNQKF
        AE+V  ELPEPALGINFARDGMNR+ WL+LV +H  SDSWL+SVAFY+ ARL+RN R R F   + LP  ++ V    ++ E +   +   +R K + K 
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRF-TASSLP--HDFVKRLTETSENEYQRITEENREKYNQKF

Query:  T
        T
Subjt:  T
B8B8I3 PHD finger protein ALFIN-LIKE 25.7e-1860.71Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASSLPHDFVKRLTETSENEYQR
        AE+V  ELPEPALGINFARDGM+R+ WLSLV +H  SDSWLLSVAF+FGARL+ N+R R F   SL +D    L   S+ ++ R
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASSLPHDFVKRLTETSENEYQR
Q75IR6 PHD finger protein ALFIN-LIKE 11.9e-1851.49Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRF-TASSLP--HDFVKRLTETSENEYQRITEENREKYNQKF
        AE+V  ELPEPALGINFARDGMNR+ WL+LV +H  SDSWL+SVAFY+ ARL+RN R R F   + LP  ++ V    ++ E +   +   +R K + K 
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRF-TASSLP--HDFVKRLTETSENEYQRITEENREKYNQKF

Query:  T
        T
Subjt:  T
Q8H383 PHD finger protein ALFIN-LIKE 25.7e-1860.71Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASSLPHDFVKRLTETSENEYQR
        AE+V  ELPEPALGINFARDGM+R+ WLSLV +H  SDSWLLSVAF+FGARL+ N+R R F   SL +D    L   S+ ++ R
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASSLPHDFVKRLTETSENEYQR
Q9SRM4 PHD finger protein ALFIN-LIKE 21.1e-1874.19Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGM RK WLSLV +H  SD WLLSV+FYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
Arabidopsis top hitse value%identityAlignment
AT2G02470.1 alfin-like 61.1e-1669.35Show/hide
Query:  EDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGAR--LDRNKRTRRF
        E+V  ELPEPALGINFARDGM  K W+SLV +H  SDSWLLSVAFYFGAR    +N+R R F
Subjt:  EDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGAR--LDRNKRTRRF
AT3G11200.1 alfin-like 28.1e-2074.19Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGM RK WLSLV +H  SD WLLSV+FYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
AT3G11200.2 alfin-like 28.1e-2074.19Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGM RK WLSLV +H  SD WLLSV+FYFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
AT5G05610.1 alfin-like 16.9e-1972.58Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGM RK WLSLV +H  SD WLLSV+ YFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
AT5G05610.2 alfin-like 16.9e-1972.58Show/hide
Query:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT
        AE+V  ELPEPALGINFARDGM RK WLSLV +H  SD WLLSV+ YFGARL+RN+R R F+
Subjt:  AEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCAAGGCAACATGCACACCGTGCGCGGAAGATGTTGCCTTGGAGCTTCCAGAGCCTGCACTTGGAATTAATTTTGCAAGAGATGGCATGAACAGAAAATATTG
GCTCTCTCTTGTTGTTATACATAGTGATTCTGATTCCTGGTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAACAAAAGGACACGGCGCTTTACAGCAT
CAAGCTTACCACATGACTTCGTCAAACGTCTTACTGAGACCAGTGAAAATGAGTACCAGAGAATTACTGAGGAAAACCGTGAAAAGTATAACCAAAAGTTCACTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCAAGGCAACATGCACACCGTGCGCGGAAGATGTTGCCTTGGAGCTTCCAGAGCCTGCACTTGGAATTAATTTTGCAAGAGATGGCATGAACAGAAAATATTG
GCTCTCTCTTGTTGTTATACATAGTGATTCTGATTCCTGGTTGCTCTCTGTGGCTTTCTATTTTGGAGCAAGACTTGACCGAAACAAAAGGACACGGCGCTTTACAGCAT
CAAGCTTACCACATGACTTCGTCAAACGTCTTACTGAGACCAGTGAAAATGAGTACCAGAGAATTACTGAGGAAAACCGTGAAAAGTATAACCAAAAGTTCACTGATTAA
Protein sequenceShow/hide protein sequence
MSSKATCTPCAEDVALELPEPALGINFARDGMNRKYWLSLVVIHSDSDSWLLSVAFYFGARLDRNKRTRRFTASSLPHDFVKRLTETSENEYQRITEENREKYNQKFTD