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PI0007750 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007750
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 297 family
Genome locationchr07:14197977..14200170
RNA-Seq ExpressionPI0007750
SyntenyPI0007750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047865.1 hypothetical protein E6C27_scaffold133G001340 [Cucumis melo var. makuwa]4.3e-1875.38Show/hide
Query:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN
        +Y +DHVSLCALD LESLETLE+HDKF+ELIDQATL+YVD +FAK KPSD+DLS FLDFVT  ++
Subjt:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN

KAA0054444.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]8.2e-1774.63Show/hide
Query:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYE
        +DHVSLCALD  ESL+TLE+HDKFNELIDQATLEYVD EFAKEKPS DDLS FLDF+T  ++    E
Subjt:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYE

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]8.2e-1758.51Show/hide
Query:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYELNDTKINQIGLLANKNGKKTSSRGKSV
        +DHVSLCALD LESLETLE+ DK NELIDQATLEYVD EF+KEKPSDDDLS FL+FV   ++      N T   Q  L  N    K    G+ +
Subjt:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYELNDTKINQIGLLANKNGKKTSSRGKSV

KAE8649397.1 hypothetical protein Csa_011845 [Cucumis sativus]2.8e-1763.95Show/hide
Query:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYELNDT--KINQIGLLANKNG
        +DHVSLCALD LESLETLE+ DK NELIDQATLEYVD EF+KEKPS+DDLS FLDFVT  ++      N T  K + +GL  + +G
Subjt:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYELNDT--KINQIGLLANKNG

TYK02152.1 hypothetical protein E5676_scaffold388G00420 [Cucumis melo var. makuwa]1.4e-1672.31Show/hide
Query:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN
        +Y +DHVSLCALD LESLETLE+HD F+ELIDQATL+YVD +FAK KPSD+DLS FLDFV   ++
Subjt:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN

TrEMBL top hitse value%identityAlignment
A0A5A7U2G5 Uncharacterized protein2.1e-1875.38Show/hide
Query:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN
        +Y +DHVSLCALD LESLETLE+HDKF+ELIDQATL+YVD +FAK KPSD+DLS FLDFVT  ++
Subjt:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN

A0A5A7V4I7 Uncharacterized protein2.0e-1658.7Show/hide
Query:  SQLSMSLGELVLNEAKHEVLLKFEVFARQVGRSEYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDF
        S+LS    E    E   EV  K EV    +  ++  +DH+SLCAL+  ESLETLEKHD+F+ELIDQATLEYV+ EFAK KPSDDD+S FLDF
Subjt:  SQLSMSLGELVLNEAKHEVLLKFEVFARQVGRSEYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDF

A0A5D3BTM3 Uncharacterized protein6.8e-1772.31Show/hide
Query:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN
        +Y +DHVSLCALD LESLETLE+HD F+ELIDQATL+YVD +FAK KPSD+DLS FLDFV   ++
Subjt:  EYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN

A0A5D3CSW0 Retrovirus-related Pol polyprotein from transposon 297 family4.0e-1774.63Show/hide
Query:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYE
        +DHVSLCALD  ESL+TLE+HDKFNELIDQATLEYVD EFAKEKPS DDLS FLDF+T  ++    E
Subjt:  SDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDNRPRYE

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family2.0e-1678.33Show/hide
Query:  HVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN
        HVSLCALD LESL+ LE+HDKFNELIDQATLE+V+ EFAK KPSDDDLS FLDFVT  ++
Subjt:  HVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAKEKPSDDDLSTFLDFVTKYDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGTTTCGAATAATTGTGAAAGGAAAATACACAATCGAAAAGAAAGAAGAGTTAGGCGATCTGGTGAATGCGATGAAGTATGGAGCTTGATAAGTCAGTTGAGTAT
GAGCTTGGGCGAGCTGGTGCTGAATGAGGCGAAGCACGAGGTACTTCTGAAGTTTGAAGTGTTCGCGAGGCAAGTTGGGCGTTCAGAGTATGGAAGTGATCATGTTTCAT
TATGTGCACTTGATGCTTTAGAATCATTGGAAACTTTAGAAAAGCATGATAAATTCAATGAGCTTATAGATCAAGCAACTCTAGAATATGTTGATTATGAATTTGCCAAG
GAGAAACCTAGTGATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAAATATGATAATAGACCCCGATACGAGCTCAACGACACTAAAATCAACCAAATTGGACTTCT
AGCAAACAAAAACGGTAAAAAAACAAGCTCAAGGGGCAAATCAGTAATTTCCCAGAAGAAATTCAAAGCATTTCCGCGCGACAAGATCACCCAGAGACCAAAACACATAA
CAAATGCGTCAGCCTCTCTTCGCGAAGCTCACCGGCAGCCTGCAGAATACCCATTTCGTTCTCAGACGCCCATTTCGCAACTCGCAGCGCTTCCTTCAGCCCACCTTAGT
GCCCCGCACGTCATCTCATGGCTCATCCTGCGTTTTGATCTCCCGAGCTCGCATACTGCCTTCTCTGCAGAGCCTCATTTCGCCTCGCATCAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGTTTCGAATAATTGTGAAAGGAAAATACACAATCGAAAAGAAAGAAGAGTTAGGCGATCTGGTGAATGCGATGAAGTATGGAGCTTGATAAGTCAGTTGAGTAT
GAGCTTGGGCGAGCTGGTGCTGAATGAGGCGAAGCACGAGGTACTTCTGAAGTTTGAAGTGTTCGCGAGGCAAGTTGGGCGTTCAGAGTATGGAAGTGATCATGTTTCAT
TATGTGCACTTGATGCTTTAGAATCATTGGAAACTTTAGAAAAGCATGATAAATTCAATGAGCTTATAGATCAAGCAACTCTAGAATATGTTGATTATGAATTTGCCAAG
GAGAAACCTAGTGATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAAATATGATAATAGACCCCGATACGAGCTCAACGACACTAAAATCAACCAAATTGGACTTCT
AGCAAACAAAAACGGTAAAAAAACAAGCTCAAGGGGCAAATCAGTAATTTCCCAGAAGAAATTCAAAGCATTTCCGCGCGACAAGATCACCCAGAGACCAAAACACATAA
CAAATGCGTCAGCCTCTCTTCGCGAAGCTCACCGGCAGCCTGCAGAATACCCATTTCGTTCTCAGACGCCCATTTCGCAACTCGCAGCGCTTCCTTCAGCCCACCTTAGT
GCCCCGCACGTCATCTCATGGCTCATCCTGCGTTTTGATCTCCCGAGCTCGCATACTGCCTTCTCTGCAGAGCCTCATTTCGCCTCGCATCAAGCTTAA
Protein sequenceShow/hide protein sequence
MRVSNNCERKIHNRKERRVRRSGECDEVWSLISQLSMSLGELVLNEAKHEVLLKFEVFARQVGRSEYGSDHVSLCALDALESLETLEKHDKFNELIDQATLEYVDYEFAK
EKPSDDDLSTFLDFVTKYDNRPRYELNDTKINQIGLLANKNGKKTSSRGKSVISQKKFKAFPRDKITQRPKHITNASASLREAHRQPAEYPFRSQTPISQLAALPSAHLS
APHVISWLILRFDLPSSHTAFSAEPHFASHQA