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PI0007762 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007762
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:19920371..19920535
RNA-Seq ExpressionPI0007762
SyntenyPI0007762
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037721.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.2e-1988.68Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN
        MTNSEITDNLDEGDS Y TTGGDEINYIE SNEWS+WRDQLAHTMF+DWELR+
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-1885.19Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTNSEI D+LDEGDS YATTGGDEINYIE SNEWS+WRDQLAHTMF+DWEL+ Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

KAA0063753.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.3e-1783.33Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTNSEI D+LDE DS YATTGGDEINYIE SNEWS+WRDQLAHTMF+DWEL +Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

TYK10940.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.1e-1886.79Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN
        MTNSEITDNLDE DS Y TTGGDEINYIE SNEWS+WRDQLAHTMF+DWELR+
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN

XP_008441953.1 PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo]3.9e-1783.33Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTN+EI D+LDEGDS YATTGGDEINYIE SNEWS+ RDQLAHTMF+DWELR+Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7T808 Putative nuclease HARBI11.5e-1988.68Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN
        MTNSEITDNLDEGDS Y TTGGDEINYIE SNEWS+WRDQLAHTMF+DWELR+
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN

A0A5A7V6M3 Putative nuclease HARBI11.1e-1783.33Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTNSEI D+LDE DS YATTGGDEINYIE SNEWS+WRDQLAHTMF+DWEL +Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

A0A5D3CDG6 Putative nuclease HARBI11.9e-1783.33Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTN+EI D+LDEGDS YATTGGDEINYIE SNEWS+ RDQLAHTMF+DWELR+Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

A0A5D3CHV9 Putative nuclease HARBI11.0e-1886.79Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN
        MTNSEITDNLDE DS Y TTGGDEINYIE SNEWS+WRDQLAHTMF+DWELR+
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRN

A0A5D3DG22 Retrotransposon protein2.9e-1885.19Show/hide
Query:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ
        MTNSEI D+LDEGDS YATTGGDEINYIE SNEWS+WRDQLAHTMF+DWEL+ Q
Subjt:  MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAACAGTGAAATAACCGACAATTTGGATGAGGGTGATTCAATCTACGCTACAACGGGAGGTGACGAGATTAATTACATTGAAACTTCAAACGAATGGAGTCAATG
GAGGGATCAATTGGCTCATACGATGTTCAATGATTGGGAGTTACGTAACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAACAGTGAAATAACCGACAATTTGGATGAGGGTGATTCAATCTACGCTACAACGGGAGGTGACGAGATTAATTACATTGAAACTTCAAACGAATGGAGTCAATG
GAGGGATCAATTGGCTCATACGATGTTCAATGATTGGGAGTTACGTAACCAGTAG
Protein sequenceShow/hide protein sequence
MTNSEITDNLDEGDSIYATTGGDEINYIETSNEWSQWRDQLAHTMFNDWELRNQ