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PI0007787 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007787
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr11:20370466..20371851
RNA-Seq ExpressionPI0007787
SyntenyPI0007787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-2672Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN GWRDNPNLRWGN+NQ+ TQA  TS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

KAA0050529.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

KAA0053321.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.4e-2773.61Show/hide
Query:  VKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        +KVTKCGVCGL+GHPNDKCP+++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  VKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]5.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

TrEMBL top hitse value%identityAlignment
A0A1S4E3R2 uncharacterized protein LOC1079919102.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

A0A5A7UAL2 Retrotransposon gag protein4.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVC L+GHPNDKCP+++E+ N++RKYDP GNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

A0A5A7UID2 Retrotransposon gag protein3.6e-2773.61Show/hide
Query:  VKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        +KVTKCGVCGL+GHPNDKCP+++E+ N++R+YDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  VKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

A0A5D3CRR8 Retrotransposon gag protein8.0e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N++RKYDP GNTYN GWRDNPNLRWGN+NQ+ TQA  TS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

A0A5D3DCG3 Retrotransposon gag protein2.7e-2772Show/hide
Query:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCGVCGL+GHPNDKCP+++E+ N+++KYDP GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGTCGGGGAGCGACGGTGGAAATGTGAAAGTTACCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGTCGGTTGGAGAGACAATCCCAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTACTTCAAATAATCAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGTCGGGGAGCGACGGTGGAAATGTGAAAGTTACCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCCCAAGGAAATACTTACAACGTCGGTTGGAGAGACAATCCCAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTACTTCAAATAATCAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAA
Protein sequenceShow/hide protein sequence
MAPLSGSDGGNVKVTKCGVCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQATNVSINKCNKQVRRQR