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PI0007833 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007833
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr04:17187032..17187235
RNA-Seq ExpressionPI0007833
SyntenyPI0007833
Gene Ontology termsGO:0051716 - cellular response to stimulus (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]2.3e-1155.22Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        M G   +IL+G+  LTK ECSLKTI+KTW+EEDQ FL+EFQ +E+E   E + +  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

KAA0066418.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]1.4e-1161.19Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG++PIIL+G+  LTK+E SLKTITKTWD EDQ FL+EF N+E+EG      +  E  DEE+LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

TYK22651.1 reverse transcriptase [Cucumis melo var. makuwa]1.8e-1153.73Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG   ++L+G+  LTK+ECSLKTI+KTW+EEDQ FLLEFQ VE+  + E++ +  E G++ +LPM+
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

TYK23088.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]4.2e-1361.19Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG   +IL G+S  TK ECSLKTI+KTW+ EDQ FLLEFQNVE++ + EE+ K  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.3e-1155.22Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        M G   +IL+G+  LTK ECSLKTI+KTW+EEDQ FL+EFQ +E+E   E + +  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

TrEMBL top hitse value%identityAlignment
A0A5A7V4D8 Disease resistance protein1.1e-1155.22Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        M G   +IL+G+  LTK ECSLKTI+KTW+EEDQ FL+EFQ +E+E   E + +  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

A0A5D3BNM8 Ty3-gypsy retroelement transposase6.6e-1261.19Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG++PIIL+G+  LTK+E SLKTITKTWD EDQ FL+EF N+E+EG      +  E  DEE+LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

A0A5D3DG25 Reverse transcriptase8.6e-1253.73Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG   ++L+G+  LTK+ECSLKTI+KTW+EEDQ FLLEFQ VE+  + E++ +  E G++ +LPM+
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

A0A5D3DI08 Pleiotropic drug resistance protein 1-like2.1e-1361.19Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        MAG   +IL G+S  TK ECSLKTI+KTW+ EDQ FLLEFQNVE++ + EE+ K  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein1.1e-1155.22Show/hide
Query:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI
        M G   +IL+G+  LTK ECSLKTI+KTW+EEDQ FL+EFQ +E+E   E + +  E G+E  LPMI
Subjt:  MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTGATAAACCAATAATATTGAGAGGAGAATCAGTTCTAACTAAAATGGAATGCTCACTCAAAACCATTACAAAGACGTGGGATGAAGAAGATCAAGCTTTCCT
CCTGGAATTCCAAAATGTTGAAGTCGAAGGTGAACTAGAAGAAAAGTTGAAACATAGGGAAAATGGAGATGAAGAAGAGCTGCCCATGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTGATAAACCAATAATATTGAGAGGAGAATCAGTTCTAACTAAAATGGAATGCTCACTCAAAACCATTACAAAGACGTGGGATGAAGAAGATCAAGCTTTCCT
CCTGGAATTCCAAAATGTTGAAGTCGAAGGTGAACTAGAAGAAAAGTTGAAACATAGGGAAAATGGAGATGAAGAAGAGCTGCCCATGATTTAG
Protein sequenceShow/hide protein sequence
MAGDKPIILRGESVLTKMECSLKTITKTWDEEDQAFLLEFQNVEVEGELEEKLKHRENGDEEELPMI