; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007841 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007841
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr08:240986..245670
RNA-Seq ExpressionPI0007841
SyntenyPI0007841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]2.9e-2959.7Show/hide
Query:  NLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQ-GGSGKEKCQAVTLRSGMNLTIRDPKIEHSNPTSHSTAEIDNSSNIPN
        N +    Q NDALLQSQASSI+NL++QLGQL ++ S RP+GSLPSNTE PNQ GGSGKEKCQ VTLRS  NLTIR+PK E  N TS ST +I ++SN  N
Subjt:  NLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQ-GGSGKEKCQAVTLRSGMNLTIRDPKIEHSNPTSHSTAEIDNSSNIPN

Query:  LVHFPLTNNISSSQNEDVPSEGMESTGQRDQQSE
         ++  LTNN SS QN+++P++ +EST + +Q+ E
Subjt:  LVHFPLTNNISSSQNEDVPSEGMESTGQRDQQSE

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.5e-2542.92Show/hide
Query:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNR------RGGRGRSDEGLHGG-----QG
        RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF GGML+SSYNQIK  + TMASN++EW ++ FG+R      +G RGR ++G+        QG
Subjt:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNR------RGGRGRSDEGLHGG-----QG

Query:  D-HRGEASGSHARYHNNRPQHSYHQQQSTT--------TTSSTSSSMENLLCEYMQKND------------ALLQSQASSIRNLKVQLGQLANDFSGRPQ
                 S A    N  + S    Q              +T++   N       KND              + SQASSI+N+++QLGQL +DFS RP+
Subjt:  D-HRGEASGSHARYHNNRPQHSYHQQQSTT--------TTSSTSSSMENLLCEYMQKND------------ALLQSQASSIRNLKVQLGQLANDFSGRPQ

Query:  GSLPSNTEMPNQ
         S PSNTE PNQ
Subjt:  GSLPSNTEMPNQ

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]6.3e-2434.18Show/hide
Query:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDD-------------------------------
        RFK +++ CPH+GIP CI +E FY GLN A++   DA   G +L  SYN+    +  +ASNN +W  +                                
Subjt:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDD-------------------------------

Query:  ------------------------FGNRR------------------------GGRGRSDEGLHGGQGDHRGEASGSHARYHNNRPQHSYHQQQSTTTTS
                                 GN+                         GG+G S  G  G     +G+ S         RPQ  +  Q S T   
Subjt:  ------------------------FGNRR------------------------GGRGRSDEGLHGGQGDHRGEASGSHARYHNNRPQHSYHQQQSTTTTS

Query:  STSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSG
           SS+E+L+ +YM KNDA++QSQA+S+RNL+VQLGQLAND   RPQG+LPS+TE P +   GKE C+AVTLRSG
Subjt:  STSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSG

XP_030509064.1 uncharacterized protein LOC115723726 [Cannabis sativa]1.1e-2334.5Show/hide
Query:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNRR--------------------------
        RFK +++ CPH+GIP CI +E FY GLN  ++   DA   G +L  SYN+    +  +ASNN +W  +     R                          
Subjt:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNRR--------------------------

Query:  ----GGRGRSDEGLH----------------------------GGQGDH----RGEASGSHARYHNNRPQHSYHQQQSTTTTSSTSSSMENLLCEYMQKN
            GG  +    +                             GGQG+     +G+   S     + +P+H    QQ     SS +SS+E+L+ +YM KN
Subjt:  ----GGRGRSDEGLH----------------------------GGQGDH----RGEASGSHARYHNNRPQHSYHQQQSTTTTSSTSSSMENLLCEYMQKN

Query:  DALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSG
        D ++QSQA+S++NLK+QLGQLAND   RPQG+LPS+TE P +    KE C+AVTLRSG
Subjt:  DALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSG

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]6.3e-3237.07Show/hide
Query:  NATYIAHDLDRPIRLYAAPNLDNFNPG------IAYPVFGEN---------ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSY
        N   +A D  R IR YAAP  +  NP       +   +F E           RFK +++ CPH+GIP CI ME FY GLN A++   DA   G +L  SY
Subjt:  NATYIAHDLDRPIRLYAAPNLDNFNPG------IAYPVFGEN---------ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSY

Query:  NQIKATVYTMASNNEEWDEDDFGNRRGGRGRSDEGL------------------------HGGQGDHRGEASGSHARYH----NNRPQHSYHQQQSTTTT
        N+    + T+ASNN +W      N R    R   G+                         GGQG     A     + +    + +P+HS H Q      
Subjt:  NQIKATVYTMASNNEEWDEDDFGNRRGGRGRSDEGL------------------------HGGQGDHRGEASGSHARYH----NNRPQHSYHQQQSTTTT

Query:  SSTSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSGMNLTIRDPKIEHS-NPTS
        ++  SS+E+L+ +YM KNDA++QSQA+S+RNL++QLG LAN+   RPQGSLPS+TE P +   GKE+C+++ LRSG +L   + +I+ S  PTS
Subjt:  SSTSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSGMNLTIRDPKIEHS-NPTS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein8.3e-2263.53Show/hide
Query:  ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNRRGGRGRSDEGL
        +RFKR+VKACP +GIPEC+ MEVFYFGL+K T Q  + +FVGGML+SSYNQIKAT+ +M++N++EWD+  FG+R   RGR+ EGL
Subjt:  ARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNRRGGRGRSDEGL

A0A5A7TGS2 Uncharacterized protein1.4e-2959.7Show/hide
Query:  NLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQ-GGSGKEKCQAVTLRSGMNLTIRDPKIEHSNPTSHSTAEIDNSSNIPN
        N +    Q NDALLQSQASSI+NL++QLGQL ++ S RP+GSLPSNTE PNQ GGSGKEKCQ VTLRS  NLTIR+PK E  N TS ST +I ++SN  N
Subjt:  NLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQ-GGSGKEKCQAVTLRSGMNLTIRDPKIEHSNPTSHSTAEIDNSSNIPN

Query:  LVHFPLTNNISSSQNEDVPSEGMESTGQRDQQSE
         ++  LTNN SS QN+++P++ +EST + +Q+ E
Subjt:  LVHFPLTNNISSSQNEDVPSEGMESTGQRDQQSE

A0A5A7V1F3 Retrotrans_gag domain-containing protein4.8e-2240.12Show/hide
Query:  TYIAHDLDRPIRLYAAPNLDNFNPGIAYPVFGENAR---------------------------------------------------------------F
        TY+AH+L RPIR YA P+L  FNPGIAYP FGENA                                                                F
Subjt:  TYIAHDLDRPIRLYAAPNLDNFNPGIAYPVFGENAR---------------------------------------------------------------F

Query:  KRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEE
        KRMVKAC H+GI + +LME FYFGL+K T+Q+AD++F+GG+L+SSYNQIKA + +MA+N+++
Subjt:  KRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEE

A0A5D3CC26 Uncharacterized protein1.2e-2542.92Show/hide
Query:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNR------RGGRGRSDEGLHGG-----QG
        RFKRM+K CPH+ IPEC+LME FYFGL+K T Q+A+ VF GGML+SSYNQIK  + TMASN++EW ++ FG+R      +G RGR ++G+        QG
Subjt:  RFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNR------RGGRGRSDEGLHGG-----QG

Query:  D-HRGEASGSHARYHNNRPQHSYHQQQSTT--------TTSSTSSSMENLLCEYMQKND------------ALLQSQASSIRNLKVQLGQLANDFSGRPQ
                 S A    N  + S    Q              +T++   N       KND              + SQASSI+N+++QLGQL +DFS RP+
Subjt:  D-HRGEASGSHARYHNNRPQHSYHQQQSTT--------TTSSTSSSMENLLCEYMQKND------------ALLQSQASSIRNLKVQLGQLANDFSGRPQ

Query:  GSLPSNTEMPNQ
         S PSNTE PNQ
Subjt:  GSLPSNTEMPNQ

A0A5D3DWD5 Uncharacterized protein4.5e-2059.63Show/hide
Query:  SDEGLHGGQGDHRGEASGSHARYHNNRPQHSY-HQQQSTTTTSSTSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMP
        S + + GGQG + G+ASG   R H +RP HS   QQQ+TT T S SSSME L+  YM++NDALLQSQA+SIRNL++Q+GQ+A DFS RPQ  LPSNTEM 
Subjt:  SDEGLHGGQGDHRGEASGSHARYHNNRPQHSY-HQQQSTTTTSSTSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMP

Query:  NQGGSGKEK
        NQ G  K++
Subjt:  NQGGSGKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTAGTAAAACGAAATATGTGACAGAAGTTGGAATACAAATACCAAAGTATTTTTTGGAGTTCAAAGATGCAGTATTGTCAATGTTTGAGTTATTTGTTGAAGT
GAAGAAACTACAAAAAAGTACAGAACAAGATGAAGGAGGAGAATATGAAAAAGATCGTGATGACATTGATGGGGCAGGAGAAGGAGTGGTTGAAAGAGGTGAAGGTGTAG
ATCATGATACGATGGACAACCATACTAGAGATGGGGGACTTGAGGAGAGTAATGAAATAAACGACACCGGTAATGAAGATGAGGGAAATAATAATGAAGATAAGGGAAAT
ATTTCCCTCATCTTTATTACCGGTGTCGTTTATTTCATTACTCTCCTCAAGTCCCCATCTCTGGTATCGTTGTCCAAAGAAGTTCAATTTCAGCTGAATCGTGTGTTCAA
ACCCAAAGAGCATGTGAACAAGTTTATGAGTGACGGTGAACAGCCGCAATTCGAACTTGACCCTGAAATTGAGCGAACATTTCGGCGTAATCGACAAAGAGGGAGGCAAA
GACAAGCAAGAAGAATGGAAAATAATAATAATAGAAACGCCCCTCCGCCGCAAGTTGTCCAAGAACCAAACGCCACCTACATAGCACATGACCTGGACAGGCCAATTAGG
TTATATGCAGCGCCCAACCTCGACAACTTCAACCCAGGGATCGCCTACCCTGTATTTGGCGAAAATGCAAGGTTCAAGAGGATGGTCAAAGCATGCCCCCACAATGGCAT
TCCCGAATGCATATTGATGGAGGTCTTCTACTTTGGCTTGAACAAGGCGACACAGCAGACTGCTGATGCTGTGTTTGTGGGTGGTATGTTGAAAAGCTCCTACAACCAGA
TTAAAGCAACAGTGTACACGATGGCAAGCAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGGAAGAAGCGACGAAGGGCTACATGGTGGT
CAAGGTGATCATCGCGGGGAAGCATCTGGCTCCCACGCGAGGTACCACAACAACAGACCCCAACATTCCTATCATCAACAACAATCCACCACCACTACTTCATCCACTTC
ATCATCCATGGAGAACCTTCTCTGCGAGTACATGCAAAAAAATGATGCCCTTCTACAAAGCCAAGCTTCATCAATTCGCAATCTGAAAGTACAATTAGGGCAGCTAGCCA
ACGATTTCTCCGGAAGACCACAGGGATCCCTCCCAAGTAATACAGAAATGCCAAACCAGGGGGGATCTGGAAAAGAGAAGTGTCAAGCGGTGACACTACGCAGTGGAATG
AATCTGACCATCCGTGATCCTAAAATCGAACATAGCAACCCCACTTCTCATTCTACTGCCGAAATTGATAACTCAAGTAACATTCCAAATCTTGTACATTTCCCTTTAAC
TAACAATATTTCTTCCTCACAGAATGAAGATGTGCCAAGCGAGGGCATGGAGAGCACGGGGCAACGCGATCAGCAGAGTGAAATAAAAGTTGCAATGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTAGTAAAACGAAATATGTGACAGAAGTTGGAATACAAATACCAAAGTATTTTTTGGAGTTCAAAGATGCAGTATTGTCAATGTTTGAGTTATTTGTTGAAGT
GAAGAAACTACAAAAAAGTACAGAACAAGATGAAGGAGGAGAATATGAAAAAGATCGTGATGACATTGATGGGGCAGGAGAAGGAGTGGTTGAAAGAGGTGAAGGTGTAG
ATCATGATACGATGGACAACCATACTAGAGATGGGGGACTTGAGGAGAGTAATGAAATAAACGACACCGGTAATGAAGATGAGGGAAATAATAATGAAGATAAGGGAAAT
ATTTCCCTCATCTTTATTACCGGTGTCGTTTATTTCATTACTCTCCTCAAGTCCCCATCTCTGGTATCGTTGTCCAAAGAAGTTCAATTTCAGCTGAATCGTGTGTTCAA
ACCCAAAGAGCATGTGAACAAGTTTATGAGTGACGGTGAACAGCCGCAATTCGAACTTGACCCTGAAATTGAGCGAACATTTCGGCGTAATCGACAAAGAGGGAGGCAAA
GACAAGCAAGAAGAATGGAAAATAATAATAATAGAAACGCCCCTCCGCCGCAAGTTGTCCAAGAACCAAACGCCACCTACATAGCACATGACCTGGACAGGCCAATTAGG
TTATATGCAGCGCCCAACCTCGACAACTTCAACCCAGGGATCGCCTACCCTGTATTTGGCGAAAATGCAAGGTTCAAGAGGATGGTCAAAGCATGCCCCCACAATGGCAT
TCCCGAATGCATATTGATGGAGGTCTTCTACTTTGGCTTGAACAAGGCGACACAGCAGACTGCTGATGCTGTGTTTGTGGGTGGTATGTTGAAAAGCTCCTACAACCAGA
TTAAAGCAACAGTGTACACGATGGCAAGCAATAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGGAAGAAGCGACGAAGGGCTACATGGTGGT
CAAGGTGATCATCGCGGGGAAGCATCTGGCTCCCACGCGAGGTACCACAACAACAGACCCCAACATTCCTATCATCAACAACAATCCACCACCACTACTTCATCCACTTC
ATCATCCATGGAGAACCTTCTCTGCGAGTACATGCAAAAAAATGATGCCCTTCTACAAAGCCAAGCTTCATCAATTCGCAATCTGAAAGTACAATTAGGGCAGCTAGCCA
ACGATTTCTCCGGAAGACCACAGGGATCCCTCCCAAGTAATACAGAAATGCCAAACCAGGGGGGATCTGGAAAAGAGAAGTGTCAAGCGGTGACACTACGCAGTGGAATG
AATCTGACCATCCGTGATCCTAAAATCGAACATAGCAACCCCACTTCTCATTCTACTGCCGAAATTGATAACTCAAGTAACATTCCAAATCTTGTACATTTCCCTTTAAC
TAACAATATTTCTTCCTCACAGAATGAAGATGTGCCAAGCGAGGGCATGGAGAGCACGGGGCAACGCGATCAGCAGAGTGAAATAAAAGTTGCAATGCAATAG
Protein sequenceShow/hide protein sequence
MGSSKTKYVTEVGIQIPKYFLEFKDAVLSMFELFVEVKKLQKSTEQDEGGEYEKDRDDIDGAGEGVVERGEGVDHDTMDNHTRDGGLEESNEINDTGNEDEGNNNEDKGN
ISLIFITGVVYFITLLKSPSLVSLSKEVQFQLNRVFKPKEHVNKFMSDGEQPQFELDPEIERTFRRNRQRGRQRQARRMENNNNRNAPPPQVVQEPNATYIAHDLDRPIR
LYAAPNLDNFNPGIAYPVFGENARFKRMVKACPHNGIPECILMEVFYFGLNKATQQTADAVFVGGMLKSSYNQIKATVYTMASNNEEWDEDDFGNRRGGRGRSDEGLHGG
QGDHRGEASGSHARYHNNRPQHSYHQQQSTTTTSSTSSSMENLLCEYMQKNDALLQSQASSIRNLKVQLGQLANDFSGRPQGSLPSNTEMPNQGGSGKEKCQAVTLRSGM
NLTIRDPKIEHSNPTSHSTAEIDNSSNIPNLVHFPLTNNISSSQNEDVPSEGMESTGQRDQQSEIKVAMQ