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PI0007849 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007849
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCoatomer subunit zeta
Genome locationchr04:30143761..30147815
RNA-Seq ExpressionPI0007849
SyntenyPI0007849
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
InterPro domainsIPR011012 - Longin-like domain superfamily
IPR022775 - AP complex, mu/sigma subunit
IPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038809.1 SNARE-like superfamily protein [Cucumis melo var. makuwa]3.5e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_004136347.1 TSET complex member tstD [Cucumis sativus]2.2e-7598.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]2.7e-76100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]2.9e-7598.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPP EF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

XP_038896955.1 TSET complex member tstD [Benincasa hispida]5.9e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        +PTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

TrEMBL top hitse value%identityAlignment
A0A0A0LHA5 Coatomer subunit zeta1.1e-7598.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEEL+VASHKSVYIVYT LGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A1S3CRC6 Coatomer subunit zeta1.3e-76100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5A7TBS4 Coatomer subunit zeta1.7e-7699.32Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGD+AVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A5D3E691 Coatomer subunit zeta1.3e-76100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

A0A6J1BYX2 Coatomer subunit zeta1.4e-7598.64Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITS+IKDACGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF
        APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPP EF
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF

SwissProt top hitse value%identityAlignment
C0HLF1 TSET complex member tstD7.9e-1531.94Show/hide
Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDAC-
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELAL++V F I  ++KD C 
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDAC-

Query:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK
         K  TE+ F+++  K  L LDEI+  G L+  + + I+    LK
Subjt:  GKAPTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLK

Q54CA7 Probable coatomer subunit zeta-B8.2e-0428.78Show/hide
Query:  AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKD-EYDELALAEVIFVITSAIKDACGK
        A+++ ++ G  L   F+  P      L  +    KL  +  K   N EL +  +K   ++ +   DV ++VVG     +ELAL +V+  + S  K AC  
Subjt:  AVLIANSVGNILVERFHGVPAE--ERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKD-EYDELALAEVIFVITSAIKDACGK

Query:  AP----TERLFLDKYGKICLCLDEIVWTGILENTEKDRI
              T++ FL+ Y  I L +DEIV  GI+   +++ I
Subjt:  AP----TERLFLDKYGKICLCLDEIVWTGILENTEKDRI

Q5NA06 Coatomer subunit zeta-31.1e-0526.72Show/hide
Query:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTE
        +L+ +S G  +  +++          ++F   + A   K +   E  +    S ++VY  + D+  +V G DE +EL LA V+   + AI          
Subjt:  VLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTE

Query:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI
        R  L+    I LCLDE+V  GI+  T+   I
Subjt:  RLFLDKYGKICLCLDEIVWTGILENTEKDRI

Arabidopsis top hitse value%identityAlignment
AT1G15370.1 SNARE-like superfamily protein2.6e-6982.19Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVYIVYT+LGDV++++VGKDEYDELALAE I++IT+A+KD CGK
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGK

Query:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE
         PTER+FLDKYG+ICLCLDEIVW G+LENT+KDRIKRLIRLKPP+E
Subjt:  APTERLFLDKYGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGGCTGTGCTGATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGCGTTCCGGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCT
GGGAGCTGATAATCTCAAAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTCG
GGAAGGACGAATATGATGAATTGGCTTTGGCAGAAGTGATCTTTGTTATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAA
TATGGAAAGATTTGTTTGTGCCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGAGTT
TTGA
mRNA sequenceShow/hide mRNA sequence
CTTAATTGGTGCCTTTAGAAGGAAAAAGAGAGAAAAAAAGGAAAAAGAGAGAAAAAAAGGAAAAACAGGTGAGAGAGAAAATCTGGGAATGTAAGATTCATTTCGAAGCT
TCGAATTTTCCCGGTGGCCAAAAGCCCTCAGCGAGATCTTTTCCATCCGAAATTCCGATCGGAGAGTTGAAATCTGACTGCGAAAGATCAGGCATGTTGCTGGCTGTGCT
GATCGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCATGGCGTTCCGGCAGAGGAGCGATTGCATTGGCGATCATTTTTAGTGAAGCTGGGAGCTGATAATCTCA
AAGGTGCGAAAAATGAAGAGCTATATGTTGCTTCACACAAGTCTGTATATATTGTTTACACTGTGCTTGGCGATGTTGCAGTTTATGTTGTCGGGAAGGACGAATATGAT
GAATTGGCTTTGGCAGAAGTGATCTTTGTTATAACATCAGCGATAAAGGATGCCTGTGGGAAAGCTCCAACTGAGCGCTTGTTTCTCGACAAATATGGAAAGATTTGTTT
GTGCCTTGATGAAATTGTCTGGACGGGCATCTTGGAGAACACGGAGAAAGACAGGATCAAGAGGCTGATAAGGTTAAAACCTCCCAATGAGTTTTGATCAATGAAACGGA
TGCACACTATCTTGTTGGTTGCTGCTTTCAACTATTTTACTCAACTTGTGCCAAAGAATTGTTTCAAGCTCTGTGCAATTTTCATCGTGATTGATAAGTTTACTTTACTA
CCTATTCTATTTGGCTCTCATACTCTTCTTTATCGGACCCGTGCTGTGTAAAGAATTGGAGATATTGCTTTGTTCAAGATTTTCATGATGGGTAGGAAGCTTGAGAATAC
AACAAACTAGTCCAAGGGAGTGATTTTGAAATAGTTAAAATCACTTTTGTTATATTTAAATACAGGATGAATACGTCTTTAATAACTCAAAATTAGTTTAGGGTTTGATT
ATACACATGCCCTACATTTGTAATGGTTGATTGGTAGATTGCAGTGGAATTGTGGAGTAAATTTGTCATTCGCAACTAATCGTGGTTGGATTAGATGGTTGATGTATGAG
CTTGTCCGACCTAGTGGCCATTTGAGCAATAGTAATAGAACTTTGAAGGGGATGAGTTCTAATTATGGTAATCTTTCTATTTAATTAGTATGTAATATTTAATCAAATTT
TAGTAGGGTTAGATGGTTGTCTTGTTGCGGTTGCAGATACGTTTATGTTTAGTGGTTTTGAAGTTAGATGTTTGAAGTTGGATGTTTAATTATTCATCTCACATACAGGT
AAAAATGTTATTGTCTATTGTCTATCGTATCATTTTGAAATGAAATTTGAGAAATTATTTAGTGCTAATATAA
Protein sequenceShow/hide protein sequence
MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYIVYTVLGDVAVYVVGKDEYDELALAEVIFVITSAIKDACGKAPTERLFLDK
YGKICLCLDEIVWTGILENTEKDRIKRLIRLKPPNEF