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PI0007859 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007859
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:15514122..15514581
RNA-Seq ExpressionPI0007859
SyntenyPI0007859
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466949.1 PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]4.5e-4062.2Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M  K+ GSNI  S TID RI+ MK+ F A+ EM  P+CSGFGWNDE KCI+AEKE+FD+WVKSHP  +GL+NK F HYD+L YVFGKDRATG R ++F D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        +GSN P G+  F AD   DT+ P MYS
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

XP_031739703.1 uncharacterized protein LOC116403241 [Cucumis sativus]1.6e-4061.42Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M  K+SG N+  +  ID RI+ +K+++QAI EM  PSCSGFGWND+ KCI+AEKELFDNWV+SHPA  GL+NK F +YD+L Y+FGKDRATGA  +TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        VGSNVP G + FP    ND +IP M S
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]3.0e-4465.35Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        MV K+ G N+  +  IDYRI+ +K+++QAI EM  PSCSGFGWND+ KCIIAEKE FDNWV+SHPA +GL+NKPFP+YD   YVFGKDRA GA V+TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        VGSNVP GF+ FP    ND EIP M S
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

XP_031743896.1 uncharacterized protein LOC116404722 [Cucumis sativus]2.2e-4262.2Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M  K+ G N+  +  ID  I+ +K+++QAI EMH PSCSGFGWND+ KCI+AEKELFDNWV+SH A +GL+NKPFP+YD L Y+FGKDRATGA  +TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        VGSNVP GF+ FP    ND +IP M+S
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

XP_031744343.1 uncharacterized protein LOC116404989 [Cucumis sativus]7.0e-4160.63Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        MV K+ G N+  +  ID RI+ +K+++Q I EM  PSC GFGWND++KCI+AEKELFDNWV+SHPA +GL+NK FP+YD+L YVFGKDRA G   +TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        VGSNVP GF+ FP    ND E P M S
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859532.2e-4060.94Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M EK+ G+NIQ S TID  ++++KKT+ AI EM  PSCSGFGWN+E +CIIAE++LFD+W+KSHPA +GL++K FP+YDDL YVFGKDRATGAR +TF +
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKG-FPADYGNDTEIPIMYS
        VGSNV   F    P    +D +IP MYS
Subjt:  VGSNVPRGFKG-FPADYGNDTEIPIMYS

A0A1S3CTN6 uncharacterized protein LOC1035043322.2e-4062.2Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M  K+ GSNI  S TID RI+ MK+ F A+ EM  P+CSGFGWNDE KCI+AEKE+FD+WVKSHP  +GL+NK F HYD+L YVFGKDRATG R ++F D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        +GSN P G+  F AD   DT+ P MYS
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

A0A5A7TYW0 Retrotransposon protein4.9e-4060.63Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        MVEK+ G  ++ +  ID RI+ +K+TFQAI EM  P+CSGFGWNDE KCIIAEKELFDNWV+SHPA +GL+NKPFP+YD+L YVF +DRA G   +TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKGFPADYGNDTEIPIMYS
        VGSN P G+  F    GN+ E P +Y+
Subjt:  VGSNVPRGFKGFPADYGNDTEIPIMYS

A0A5A7U0H7 Retrotransposon protein2.2e-4060.94Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M EK+ G+NIQ S TID  ++++KKT+ AI EM  PSCSGFGWN+E +CIIAE++LFD+W+KSHPA +GL++K FP+YDDL YVFGKDRATGAR +TF +
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVPRGFKG-FPADYGNDTEIPIMYS
        VGSNV   F    P    +D +IP MYS
Subjt:  VGSNVPRGFKG-FPADYGNDTEIPIMYS

A0A5A7UHF7 Retrotransposon protein3.7e-4061.6Show/hide
Query:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD
        M EK+ G  ++ +  IDYRI+ +K+TFQAI EM  P+CSGFGWNDE KCIIAEKELFDNWV+SHPA +GL+NKPFP+YD+L YVFG+DRATG   +TF D
Subjt:  MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVD

Query:  VGSNVP-RGFKGFPADYGNDTEIPI
        VGSN P  G+  F    GN+   P+
Subjt:  VGSNVP-RGFKGFPADYGNDTEIPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein5.7e-0930.39Show/hide
Query:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVDVGSNVPRGFKGFPADYGN
        R++ +K  +Q+ +++ R S SGFGW+ E K   A  E++ +++K+HP  + +  +   H++DL  +FG   ATG+      D  S  PR +       G 
Subjt:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVDVGSNVPRGFKGFPADYGN

Query:  DT
        +T
Subjt:  DT

AT2G24960.1 unknown protein7.3e-0430.19Show/hide
Query:  GFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATG
        GF W+   + +I +  L+  ++K+HP       KP  ++ DLC ++G   A G
Subjt:  GFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATG

AT2G24960.2 unknown protein1.6e-0629.63Show/hide
Query:  SGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATG
        +GF W+     +IA+ ++++ ++++HP       K  P Y +LC++FGK+ + G
Subjt:  SGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATG

AT4G02210.1 unknown protein9.2e-0727.94Show/hide
Query:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFG
        R +++++ F AI  + R    GF W++E + + A+  ++ +++K+H      + +P P+Y DLC + G
Subjt:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFG

AT4G02210.2 unknown protein9.2e-0727.94Show/hide
Query:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFG
        R +++++ F AI  + R    GF W++E + + A+  ++ +++K+H      + +P P+Y DLC + G
Subjt:  RIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGAAGATGTCAGGATCTAACATCCAGGGTTCGCCGACAATAGACTATCGGATTCAAAACATGAAGAAAACGTTCCAGGCTATCGTAGAAATGCACAGGCCGTC
ATGTAGTGGGTTCGGTTGGAACGATGAAATGAAGTGCATCATCGCTGAGAAGGAGTTGTTTGACAATTGGGTGAAGAGTCATCCTGCTTTCGAGGGCCTCATAAACAAAC
CATTTCCCCATTACGACGACCTGTGCTACGTATTTGGAAAAGATCGTGCTACGGGAGCTCGTGTGCAGACATTTGTCGATGTAGGGTCGAATGTGCCTAGAGGATTCAAG
GGATTTCCCGCTGATTATGGAAACGATACGGAGATCCCTATAATGTACAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGAAGATGTCAGGATCTAACATCCAGGGTTCGCCGACAATAGACTATCGGATTCAAAACATGAAGAAAACGTTCCAGGCTATCGTAGAAATGCACAGGCCGTC
ATGTAGTGGGTTCGGTTGGAACGATGAAATGAAGTGCATCATCGCTGAGAAGGAGTTGTTTGACAATTGGGTGAAGAGTCATCCTGCTTTCGAGGGCCTCATAAACAAAC
CATTTCCCCATTACGACGACCTGTGCTACGTATTTGGAAAAGATCGTGCTACGGGAGCTCGTGTGCAGACATTTGTCGATGTAGGGTCGAATGTGCCTAGAGGATTCAAG
GGATTTCCCGCTGATTATGGAAACGATACGGAGATCCCTATAATGTACAGTTAG
Protein sequenceShow/hide protein sequence
MVEKMSGSNIQGSPTIDYRIQNMKKTFQAIVEMHRPSCSGFGWNDEMKCIIAEKELFDNWVKSHPAFEGLINKPFPHYDDLCYVFGKDRATGARVQTFVDVGSNVPRGFK
GFPADYGNDTEIPIMYS