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PI0007904 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007904
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:21153374..21153745
RNA-Seq ExpressionPI0007904
SyntenyPI0007904
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++ +R  R  E R  SSGSKRK+ GH  ++ +I+R+A+ YGN+QL  I EWP   R+D   TR   V QLE I  L+ +DR   MRILM+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]5.4e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++ +R  R  E R  SSGSKRK+ GH  ++ +I+R+AM YGN+QL  I EWP   R+D   TR   V QLE I  L+ +DR   MRI+M+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

KAA0050216.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-2351.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++G+R  R  E R   SGSKRK+ GH  ++ +I+R+A+ YGN+Q+  I EWP   R+D   TR   V QLE I  L+ IDR   M ILM+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K +YY IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

KAA0054743.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++G+   R +E R  SSGSKRK+ GH  ++ +I+R+A+ YGN+QL  I EWP   R+D   TR   V QLE IL L+ +DR   MRIL++N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL +PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-2657.72Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        M  DD++G+RP+RS EGR GSSGSKRKQ G   E +EIIR+ M + ND+LKAI EW    R+D        V QL+RI  LSR DRV  M+ILM N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDNA
        KAFL I D+ KL+Y TII QDNA
Subjt:  KAFLQIPDDFKLNYYTIILQDNA

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein3.4e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++ +R  R  E R  SSGSKRK+ GH  ++ +I+R+A+ YGN+QL  I EWP   R+D   TR   V QLE I  L+ +DR   MRILM+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

A0A5A7TYQ6 Retrotransposon protein2.6e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++ +R  R  E R  SSGSKRK+ GH  ++ +I+R+AM YGN+QL  I EWP   R+D   TR   V QLE I  L+ +DR   MRI+M+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

A0A5A7U7R0 Retrotransposon protein2.4e-2351.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++G+R  R  E R   SGSKRK+ GH  ++ +I+R+A+ YGN+Q+  I EWP   R+D   TR   V QLE I  L+ IDR   M ILM+N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL++PD+ K +YY IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

A0A5A7UFK2 Retrotransposon protein3.4e-2251.64Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        MSPDD++G+   R +E R  SSGSKRK+ GH  ++ +I+R+A+ YGN+QL  I EWP   R+D   TR   V QLE IL L+ +DR   MRIL++N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDN
        KAFL +PD+ K  Y +IILQ+N
Subjt:  KAFLQIPDDFKLNYYTIILQDN

A0A5A7V469 Retrotransposon protein1.3e-2657.72Show/hide
Query:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM
        M  DD++G+RP+RS EGR GSSGSKRKQ G   E +EIIR+ M + ND+LKAI EW    R+D        V QL+RI  LSR DRV  M+ILM N+ DM
Subjt:  MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDM

Query:  KAFLQIPDDFKLNYYTIILQDNA
        KAFL I D+ KL+Y TII QDNA
Subjt:  KAFLQIPDDFKLNYYTIILQDNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCAGATGACGTAGTGGGATCACGTCCTGAACGATCCGATGAGGGTAGGGCGGGTTCGAGCGGATCGAAAAGGAAGCAGAGAGGTCATAATGCAGAAGCTCTGGA
AATCATTCGCAGCGCCATGGGATATGGGAATGACCAGCTGAAGGCTATTACAGAATGGCCGAAGGAAGCACGGGAAGACGAATACACAACCCGTGCAGCAGCCGTTACCC
AATTAGAGAGAATCCTTGGACTATCAAGAATCGACAGGGTGCATTGTATGCGAATACTCATGCAAAACATGGTCGATATGAAAGCGTTTTTGCAAATACCTGACGACTTT
AAGCTGAACTACTACACGATCATTCTGCAAGATAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCAGATGACGTAGTGGGATCACGTCCTGAACGATCCGATGAGGGTAGGGCGGGTTCGAGCGGATCGAAAAGGAAGCAGAGAGGTCATAATGCAGAAGCTCTGGA
AATCATTCGCAGCGCCATGGGATATGGGAATGACCAGCTGAAGGCTATTACAGAATGGCCGAAGGAAGCACGGGAAGACGAATACACAACCCGTGCAGCAGCCGTTACCC
AATTAGAGAGAATCCTTGGACTATCAAGAATCGACAGGGTGCATTGTATGCGAATACTCATGCAAAACATGGTCGATATGAAAGCGTTTTTGCAAATACCTGACGACTTT
AAGCTGAACTACTACACGATCATTCTGCAAGATAATGCTTAA
Protein sequenceShow/hide protein sequence
MSPDDVVGSRPERSDEGRAGSSGSKRKQRGHNAEALEIIRSAMGYGNDQLKAITEWPKEAREDEYTTRAAAVTQLERILGLSRIDRVHCMRILMQNMVDMKAFLQIPDDF
KLNYYTIILQDNA