CuGenDBv2

Gene ID	PI0007909
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	PMD domain-containing protein
Genome location	chr06:9776798..9777469
RNA-Seq Expression	PI0007909
Synteny	PI0007909
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]

2.3e-100

77.23

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+KP+ G FAD+W  LDN S+L +L +E+PLS+GKSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVPGEFCFTDCYWEWLE VVGRN RLLY   L+  VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T +DKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]

7.6e-99

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQ RED LSL+V+KP+ G FAD+WS LDN S+L +LF+E+PLS+ KSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          V KVPGEFCFTDCYWEWLE VVG+N RLLY   L+  VTASLYTYDR+ DVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]

1.2e-99

77.23

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+KP+ G FAD+W  LDN S+L +L +EIPLS+GKSAW+LQSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVP EFCFTDCYWEWLE VVGRN RLLY   L+  VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]

7.6e-99

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQ RED LSL+V+KP+ G FAD+WS LDN S+L +LF+E+PLS+ KSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          V KVPGEFCFTDCYWEWLE VVG+N RLLY   L+  VTASLYTYDR+ DVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]

1.3e-98

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+K + G FAD+W  LDN S+L +L +E+PLS+GKSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVPGEFCFTDCYWEWLE VVGRN RLLY   L+ +VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSF GLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPT CQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TFC8 PMD domain-containing protein

6.2e-99

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+K + G FAD+W  LDN S+L +L +E+PLS+GKSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVPGEFCFTDCYWEWLE VVGRN RLLY   L+ +VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSF GLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPT CQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

A0A5A7TX42 Uncharacterized protein

1.1e-100

77.23

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+KP+ G FAD+W  LDN S+L +L +E+PLS+GKSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVPGEFCFTDCYWEWLE VVGRN RLLY   L+  VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T +DKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

A0A5A7V4F4 PMD domain-containing protein

3.7e-99

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQ RED LSL+V+KP+ G FAD+WS LDN S+L +LF+E+PLS+ KSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          V KVPGEFCFTDCYWEWLE VVG+N RLLY   L+  VTASLYTYDR+ DVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

A0A5A7VHW8 PMD domain-containing protein

5.6e-100

77.23

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQPRED LSL+V+KP+ G FAD+W  LDN S+L +L +EIPLS+GKSAW+LQSSIH EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          VTKVP EFCFTDCYWEWLE VVGRN RLLY   L+  VTASLYTYDR+SDVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

A0A5D3BRA8 PMD domain-containing protein

3.7e-99

76.34

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Query:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW
        MVYF ERFLSG  HL+ILSD+NQ RED LSL+V+KP+ G FAD+WS LDN S+L +LF+E+PLS+ KSAWVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRW

Query:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP
          V KVPGEFCFTDCYWEWLE VVG+N RLLY   L+  VTASLYTYDR+ DVVR   EAWCPSTNTLHTMAGE+ +SLWDLWSFGGLPI+GDFYEE IP
Subjt:  SVVTKVPGEFCFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIP

Query:  SFKELI-TLRDKTKCLPTTCQYLF
        SFKEL  T RDKTKCLPTTCQYLF
Subjt:  SFKELI-TLRDKTKCLPTTCQYLF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G50750.1 Plant mobile domain protein family

5.7e-04

33.33

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Query:  DACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRG
        +A +F+ V AS+Y   ++ D++  I E WCP T T     GE  ++L D+    G  + G
Subjt:  DACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRG

AT1G50790.1 Plant mobile domain protein family

3.4e-04

35.59

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Query:  ACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRG
        A +F+ + AS Y   +++D+V  I E WCP TNT     GE  ++L D+    G  + G
Subjt:  ACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTTACTTCATAGAACGATTCTTGTCTGGAAATGGACACCTTATAATCCTTTCTGATAAGAATCAACCAAGAGAAGACAGACTCAGTCTCCTTGTAAAGAAGCCATT
TACTGGTCCTTTTGCAGATTATTGGTCGAACTTGGACAACATCTCGATTCTTTCTAAATTATTTTTGGAGATACCTTTGTCTCAGGGAAAAAGCGCATGGGTCTTGCAAT
CTTCTATCCATGATGAAGCTCCTAATGCCGATCGAGTTCTCACTCTCGGACATCGTATAATTGAAGGCCAAACCCGTTGGAGTGTCGTGACTAAGGTCCCAGGAGAGTTC
TGCTTTACTGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTCGAAATGGACGACTTCTCTATGATGCTTGTTTATTTGACATCGTAACAGCTTCTTTGTATACATA
TGATCGTAGCAGCGATGTGGTTCGAGTAATTTATGAAGCTTGGTGTCCTTCAACTAATACTCTCCATACCATGGCGGGCGAGGTATTCCTTTCCTTATGGGATTTGTGGT
CATTTGGGGGTCTTCCAATTAGGGGAGATTTCTACGAGGAAGGCATCCCTTCCTTTAAAGAGTTGATCACTTTGCGAGATAAGACAAAATGTCTCCCGACAACATGTCAA
TATCTATTCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MVYFIERFLSGNGHLIILSDKNQPREDRLSLLVKKPFTGPFADYWSNLDNISILSKLFLEIPLSQGKSAWVLQSSIHDEAPNADRVLTLGHRIIEGQTRWSVVTKVPGEF
CFTDCYWEWLEFVVGRNGRLLYDACLFDIVTASLYTYDRSSDVVRVIYEAWCPSTNTLHTMAGEVFLSLWDLWSFGGLPIRGDFYEEGIPSFKELITLRDKTKCLPTTCQ
YLF

PI0007909 (gene) of Melon (PI 482460) v1 genome