; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0007913 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007913
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:15050521..15051624
RNA-Seq ExpressionPI0007913
SyntenyPI0007913
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.3e-4954.08Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL
        Q+GERV+YD AS REARLS+FI  +GE  WPRVS EL +LWERVQ V PCLS+ D WVWV GRQGGF            G +V+ D L        +   
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL

Query:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          W +   R   + E     G WG  VELSW+  +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]5.4e-5448.96Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------
        Q+GERV+YD AS REARLSEFIG DGE +WPRVS EL +LW+RVQ VRPCLS+ DRWVWV G QGGF              R R  G L+G         
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------

Query:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW
             I+++LGTRDRL RWDSS+P S +LC+GG                 W               W VELSW+  +GIG  V RKLWRV+ CA+ YFIW
Subjt:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW

Query:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI
         E N RLHGG      ++   I + +RAR VSWRED H LI
Subjt:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]4.7e-5848.11Show/hide
Query:  IWRLVMGGGVVYGLTRGVRRRDHWQ--MGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF-------
        +W +    G  + L   +R+R+  +  +GERV+YD AS REA+LS+FI  +GE  WPRVS EL +LWERVQ V PCLS+ D WVWV GRQGGF       
Subjt:  IWRLVMGGGVVYGLTRGVRRRDHWQ--MGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF-------

Query:  -------RFRVRGRLFG-----------LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWV
               R    G L+G              I+DRL TRDRL RWDSSIP SC+LC+GG                 W               W VELSW+
Subjt:  -------RFRVRGRLFG-----------LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWV

Query:  SRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]5.2e-4953.57Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL
        Q+GERV+YD AS REARLS+FI  +GE  WPRVS EL +LWERVQ V PCL++ D WVWV GRQGGF            G +V+ D L        +   
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL

Query:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          W +   R   + E     G WG  VELSW+  +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

XP_031745548.1 uncharacterized protein LOC116405965 [Cucumis sativus]1.1e-5146.47Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------
        Q G+RV+YDV S  +ARL +F+G DG+ RWP VS +L ++W+RVQGVRP  S+ DRWVWV G    F              R    G L+G         
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------

Query:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEG--------------GWG-----------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW
             IRDRLGTRDRLSRWD SIP SCLLC G              GW                  W V LSW+  +GIGK V RKLWR++WCA+IYFIW
Subjt:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEG--------------GWG-----------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW

Query:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI
         E+N RLHGG   EP ++   IRS ++ARA SW + VH LI
Subjt:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein1.1e-4954.08Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL
        Q+GERV+YD AS REARLS+FI  +GE  WPRVS EL +LWERVQ V PCLS+ D WVWV GRQGGF            G +V+ D L        +   
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL

Query:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          W +   R   + E     G WG  VELSW+  +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein2.6e-5448.96Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------
        Q+GERV+YD AS REARLSEFIG DGE +WPRVS EL +LW+RVQ VRPCLS+ DRWVWV G QGGF              R R  G L+G         
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF--------------RFRVRGRLFG---------

Query:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW
             I+++LGTRDRL RWDSS+P S +LC+GG                 W               W VELSW+  +GIG  V RKLWRV+ CA+ YFIW
Subjt:  --LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIW

Query:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI
         E N RLHGG      ++   I + +RAR VSWRED H LI
Subjt:  NEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI

A0A5A7TZS0 Reverse transcriptase domain-containing protein2.3e-5848.11Show/hide
Query:  IWRLVMGGGVVYGLTRGVRRRDHWQ--MGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF-------
        +W +    G  + L   +R+R+  +  +GERV+YD AS REA+LS+FI  +GE  WPRVS EL +LWERVQ V PCLS+ D WVWV GRQGGF       
Subjt:  IWRLVMGGGVVYGLTRGVRRRDHWQ--MGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGF-------

Query:  -------RFRVRGRLFG-----------LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWV
               R    G L+G              I+DRL TRDRL RWDSSIP SC+LC+GG                 W               W VELSW+
Subjt:  -------RFRVRGRLFG-----------LKVIRDRLGTRDRLSRWDSSIPRSCLLCEGG-----------------WG--------------WEVELSWV

Query:  SRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

A0A5A7UP65 Reverse transcriptase2.4e-4447.42Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLFGLKVIRDRLGTRDRLSRWDSSIPR
        Q+GERV+YD AS REA LS FIG DGE  WPR  + +   WE    +RP    G R +W     GG           L  I+DRLGTRDR  RWDSS+P 
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLFGLKVIRDRLGTRDRLSRWDSSIPR

Query:  SCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRST
        SC+LCEGG                 W               W VELSW+  +GI KGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P ++ H I + 
Subjt:  SCLLCEGG-----------------WG--------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRST

Query:  VRARAVSWREDVH
        +RARA SWRED +
Subjt:  VRARAVSWREDVH

A0A5D3BDZ6 Zf-RVT domain-containing protein2.5e-4953.57Show/hide
Query:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL
        Q+GERV+YD AS REARLS+FI  +GE  WPRVS EL +LWERVQ V PCL++ D WVWV GRQGGF            G +V+ D L        +   
Subjt:  QMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLF---GLKVIRDRL------GTRDRL

Query:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH
          W +   R   + E     G WG  VELSW+  +GIGKGV RKLWRV+WCA+IYFIWNE+N RLHGG   +P IL H I + +RARA SWRED H
Subjt:  SRWDSSIPRSCLLCE-----GGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05095.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1)1.4e-0425.66Show/hide
Query:  LSRWDSSIPRSCLLCEGG-----------------WG-------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPD
        + RW  SIP  C+LC G                  WG             +   L+WV        +   + ++++ ASIYF+W E+NRRLH   +    
Subjt:  LSRWDSSIPRSCLLCEGG-----------------WG-------------WEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPD

Query:  ILIHCIRSTVRAR
         +I  I+  + A+
Subjt:  ILIHCIRSTVRAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATATGGAGGTTGGTGATGGGAGGCGGTGTCGTATATGGCTTGACCCGTGGTGTACGGAGGCGCGATCATTGGCAAATGGGTGAGAGGGTGGTGTATGATGTTGC
GAGTAGTAGGGAGGCAAGGCTTTCTGAGTTCATTGGCTCGGATGGTGAGTCGAGGTGGCCGAGGGTTTCTTGGGAGTTATTTGAGTTGTGGGAGAGGGTTCAGGGCGTCC
GTCCTTGTTTAAGTATTGGGGATCGGTGGGTGTGGGTTCTGGGTCGTCAGGGGGGTTTTCGATTTCGAGTGCGTGGGAGGCTATTCGGCCTAAAAGTGATAAGGGATAGG
TTGGGGACTCGGGATAGGTTGAGTAGGTGGGATAGTTCGATTCCTCGATCGTGTCTTCTATGCGAGGGGGGTTGGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAA
GGGTATTGGGAAGGGTGTGATGAGGAAGCTCTGGCGTGTGATCTGGTGTGCTTCTATCTACTTTATCTGGAATGAGCAGAATCGTCGTCTCCATGGTGGTCCGACTCATG
AGCCCGATATTCTGATTCATTGTATCCGGTCTACTGTTCGTGCTCGTGCTGTCTCTTGGCGGGAGGATGTTCATGATCTTATCTAG
mRNA sequenceShow/hide mRNA sequence
AGACTTTTGAGATCGTATTTGTGGAGAGGTAAGGAGGATGGGAGAGGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGCCCGTTTGGGGAAGGGGGTCTAAATATTCG
GGAGGGTAAGTCGTGGAACAGTGCGTGTATTATGAAGGTTCTTTGGTTGATGTTGACTAGTTCTGGGTCTCTATGGGTTGCTTGGGTGGAGCCTTATATTCTGAAGGGGC
GGTCGTTGTGGGCTATGGATAGTTAGGTCGGTCGGTCTTGGAGTCTTCGTGCTATTCTTAGGCTTCGTGATATCTTTAGAGAGCATGTACATATGGAGGTTGGTGATGGG
AGGCGGTGTCGTATATGGCTTGACCCGTGGTGTACGGAGGCGCGATCATTGGCAAATGGGTGAGAGGGTGGTGTATGATGTTGCGAGTAGTAGGGAGGCAAGGCTTTCTG
AGTTCATTGGCTCGGATGGTGAGTCGAGGTGGCCGAGGGTTTCTTGGGAGTTATTTGAGTTGTGGGAGAGGGTTCAGGGCGTCCGTCCTTGTTTAAGTATTGGGGATCGG
TGGGTGTGGGTTCTGGGTCGTCAGGGGGGTTTTCGATTTCGAGTGCGTGGGAGGCTATTCGGCCTAAAAGTGATAAGGGATAGGTTGGGGACTCGGGATAGGTTGAGTAG
GTGGGATAGTTCGATTCCTCGATCGTGTCTTCTATGCGAGGGGGGTTGGGGGTGGGAGGTTGAGTTGTCTTGGGTCAGTCGTAAGGGTATTGGGAAGGGTGTGATGAGGA
AGCTCTGGCGTGTGATCTGGTGTGCTTCTATCTACTTTATCTGGAATGAGCAGAATCGTCGTCTCCATGGTGGTCCGACTCATGAGCCCGATATTCTGATTCATTGTATC
CGGTCTACTGTTCGTGCTCGTGCTGTCTCTTGGCGGGAGGATGTTCATGATCTTATCTAG
Protein sequenceShow/hide protein sequence
MYIWRLVMGGGVVYGLTRGVRRRDHWQMGERVVYDVASSREARLSEFIGSDGESRWPRVSWELFELWERVQGVRPCLSIGDRWVWVLGRQGGFRFRVRGRLFGLKVIRDR
LGTRDRLSRWDSSIPRSCLLCEGGWGWEVELSWVSRKGIGKGVMRKLWRVIWCASIYFIWNEQNRRLHGGPTHEPDILIHCIRSTVRARAVSWREDVHDLI