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PI0007925 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007925
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:23253799..23254915
RNA-Seq ExpressionPI0007925
SyntenyPI0007925
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040386.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-1965.85Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGK+L+TP ++EKKV S P+ L + D+ KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
KAA0046065.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-1967.07Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQP+HANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
KAA0062400.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-2068.29Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
KAA0066512.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.2e-1967.07Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKL  QPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN LPS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
TYK26581.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-2068.29Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
TrEMBL top hitse value%identityAlignment
A0A5A7TXC8 Retrotransposon gag protein8.3e-2067.07Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQP+HANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
A0A5A7V594 Retrotransposon gag protein2.2e-2068.29Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
A0A5D3BWD4 Retrotransposon gag protein1.1e-1965.85Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGK+L+TP ++EKKV S P+ L + D+ KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
A0A5D3C4I5 Retrotransposon gag protein1.1e-1967.07Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKL  QPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN LPS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
A0A5D3DS57 Retrotransposon gag protein2.2e-2068.29Show/hide
Query:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
        MKQQ++ LT+AI K++GKGKLPAQPDHANVS ISLRSGKIL+TP ++EKKVTS P+ L + +E KEEKVETN  PS S   K
Subjt:  MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAACAAATTTCTCATCTCACATCCGCAATTGGTAAGTTAGAAGGAAAAGGCAAACTTCCGGCCCAACCGGATCATGCAAATGTCAGTACCATCTCACTTAGAAG
CGGTAAGATTCTTGAAACCCCTCCAAGTGAAGAAAAAAAGGTAACTTCTATCCCTATCCTTCTTGAAAATAATGATGAGAAAAAGGAAGAAAAAGTTGAAACAAATGCTT
TACCATCCACTTCTAATAAAGGAAAAAGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAACAAATTTCTCATCTCACATCCGCAATTGGTAAGTTAGAAGGAAAAGGCAAACTTCCGGCCCAACCGGATCATGCAAATGTCAGTACCATCTCACTTAGAAG
CGGTAAGATTCTTGAAACCCCTCCAAGTGAAGAAAAAAAGGTAACTTCTATCCCTATCCTTCTTGAAAATAATGATGAGAAAAAGGAAGAAAAAGTTGAAACAAATGCTT
TACCATCCACTTCTAATAAAGGAAAAAGGGATTGA
Protein sequenceShow/hide protein sequence
MKQQISHLTSAIGKLEGKGKLPAQPDHANVSTISLRSGKILETPPSEEKKVTSIPILLENNDEKKEEKVETNALPSTSNKGKRD