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PI0007969 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007969
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:17553222..17553998
RNA-Seq ExpressionPI0007969
SyntenyPI0007969
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0032259 - methylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054243.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.4e-3981.31Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIEEMMAARSKNTNRKNIWET
        MENPLRYA+DDSMEEYDAW+N QECDSSSGDE GN WN+NG      DIR R+VYRGHEARREVHHDYKM+I LPTY+ETIEEMMAAR KN NRKNIWET
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIEEMMAARSKNTNRKNIWET

Query:  NFSKKQS
        N SKKQS
Subjt:  NFSKKQS

KAA0056058.1 reverse transcriptase [Cucumis melo var. makuwa]1.4e-1854.21Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD--ETIEEMMAARSKNTNRKNIW
        M+ PLRYA+DDS EEY+AW+N Q+ DSSSG EQGNIWNDNG      + R  + YRG EA+RE+HHDYKM+IDLPTY+    IE  +       N  N  
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD--ETIEEMMAARSKNTNRKNIW

Query:  ETNFSKK
        +T   KK
Subjt:  ETNFSKK

KAA0057344.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]8.0e-2264.52Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIE-EMMAARSKNT
        ME PLRYA+DDS+E+ DAW+N QE DSSSGDE+GNIW+DNG      DI+ R+ YRGHEARREVHHDYKM++DLPTY+   + E    R KNT
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIE-EMMAARSKNT

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]7.7e-2576.62Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTY
        MENPLRYA++DSMEEY+AW+NGQECDSSS DEQGNIWNDN       D++ R+VYRGHEA+REVHHDYKM+IDLPTY
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTY

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]7.0e-0275.86Show/hide
Query:  ETIEEMMAARSKNTNRKNIWETNFSKKQS
        +T+EEMMAAR +NTNRK  WET+FSKKQS
Subjt:  ETIEEMMAARSKNTNRKNIWETNFSKKQS

TYK11204.1 reverse transcriptase [Cucumis melo var. makuwa]2.9e-2475.64Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD
        ME PLRY +DDSMEEY+AW+NGQECDSSS DEQGNIWNDNG      DIR R+ Y+G EARREVHHDYKM+IDLPTY+
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD

TrEMBL top hitse value%identityAlignment
A0A5A7UE06 Zf-CCHC domain-containing protein7.0e-4081.31Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIEEMMAARSKNTNRKNIWET
        MENPLRYA+DDSMEEYDAW+N QECDSSSGDE GN WN+NG      DIR R+VYRGHEARREVHHDYKM+I LPTY+ETIEEMMAAR KN NRKNIWET
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIEEMMAARSKNTNRKNIWET

Query:  NFSKKQS
        N SKKQS
Subjt:  NFSKKQS

A0A5A7UQ86 RNA-directed DNA polymerase-like protein3.9e-2264.52Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIE-EMMAARSKNT
        ME PLRYA+DDS+E+ DAW+N QE DSSSGDE+GNIW+DNG      DI+ R+ YRGHEARREVHHDYKM++DLPTY+   + E    R KNT
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIE-EMMAARSKNT

A0A5D3BQR6 Reverse transcriptase6.8e-1954.21Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD--ETIEEMMAARSKNTNRKNIW
        M+ PLRYA+DDS EEY+AW+N Q+ DSSSG EQGNIWNDNG      + R  + YRG EA+RE+HHDYKM+IDLPTY+    IE  +       N  N  
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD--ETIEEMMAARSKNTNRKNIW

Query:  ETNFSKK
        +T   KK
Subjt:  ETNFSKK

A0A5D3CJ99 Reverse transcriptase3.7e-2576.62Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTY
        MENPLRYA++DSMEEY+AW+NGQECDSSS DEQGNIWNDN       D++ R+VYRGHEA+REVHHDYKM+IDLPTY
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTY

A0A5D3CJ99 Reverse transcriptase3.4e-0275.86Show/hide
Query:  ETIEEMMAARSKNTNRKNIWETNFSKKQS
        +T+EEMMAAR +NTNRK  WET+FSKKQS
Subjt:  ETIEEMMAARSKNTNRKNIWETNFSKKQS

A0A5D3CJ99 Reverse transcriptase1.4e-2475.64Show/hide
Query:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD
        ME PLRY +DDSMEEY+AW+NGQECDSSS DEQGNIWNDNG      DIR R+ Y+G EARREVHHDYKM+IDLPTY+
Subjt:  MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCCGCTGCGATATGCCAACGATGATTCAATGGAAGAATATGACGCTTGGAAAAATGGGCAAGAATGTGATTCTTCCAGCGGTGATGAGCAAGGAAATATTTG
GAATGATAATGGAAATATTTGGAATGATGAAGATATTCGAAAGAGACGAGTTTATAGAGGACATGAAGCACGAAGGGAAGTTCATCATGATTATAAGATGAGAATTGATC
TTCCAACCTATGATGAAACTATAGAAGAAATGATGGCTGCAAGATCTAAGAATACTAACAGAAAGAACATATGGGAAACAAATTTTTCAAAGAAGCAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATCCGCTGCGATATGCCAACGATGATTCAATGGAAGAATATGACGCTTGGAAAAATGGGCAAGAATGTGATTCTTCCAGCGGTGATGAGCAAGGAAATATTTG
GAATGATAATGGAAATATTTGGAATGATGAAGATATTCGAAAGAGACGAGTTTATAGAGGACATGAAGCACGAAGGGAAGTTCATCATGATTATAAGATGAGAATTGATC
TTCCAACCTATGATGAAACTATAGAAGAAATGATGGCTGCAAGATCTAAGAATACTAACAGAAAGAACATATGGGAAACAAATTTTTCAAAGAAGCAATCTTAG
Protein sequenceShow/hide protein sequence
MENPLRYANDDSMEEYDAWKNGQECDSSSGDEQGNIWNDNGNIWNDEDIRKRRVYRGHEARREVHHDYKMRIDLPTYDETIEEMMAARSKNTNRKNIWETNFSKKQS