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PI0007972 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007972
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionArabinogalactan peptide
Genome locationchr03:688564..688752
RNA-Seq ExpressionPI0007972
SyntenyPI0007972
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0978.18Show/hide
Query:  SLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        SLMALIA+I AVASVAAQEAPAPSP SPA+SIAPS +SAC A F++L  GSTLRI
Subjt:  SLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1279.03Show/hide
Query:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        MA +S  SL+ALIAI+FAVASVAA EAPAPSP SPATSIAPS +SAC+AAF++LAFGSTLRI
Subjt:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.3e-0556.25Show/hide
Query:  MATLSNVSLMALIAIIFAVASVA---AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLR
        MA +S VS MAL+A++FAV SVA   + E+PAP P SPA S+ PS+  AC+ AFL+L FGS L+
Subjt:  MATLSNVSLMALIAIIFAVASVA---AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]2.7e-1483.87Show/hide
Query:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        MA LS VSL+ALIA+IFA++SVAAQEAPAPSP SPATSIAPS +SACLAAFL+LAFGSTLRI
Subjt:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

PON76670.1 Arabinogalactan peptide [Parasponia andersonii]3.9e-0556.92Show/hide
Query:  ATLSNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        A+ SN SL+ L+A+I  V SV     A EAPAPSP SPA++I+PS LSACLAA ++L FGS +R+
Subjt:  ATLSNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein1.3e-1483.87Show/hide
Query:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        MA LS VSL+ALIA+IFA++SVAAQEAPAPSP SPATSIAPS +SACLAAFL+LAFGSTLRI
Subjt:  MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

A0A2K3JRT7 Uncharacterized protein4.2e-0555.93Show/hide
Query:  SNVSLMALIAIIFAVASVA-AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        +N+ ++A +A+IF+V S+A A +APAPSPTSPAT+++PS ++  +AA  +LAFGSTLRI
Subjt:  SNVSLMALIAIIFAVASVA-AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

A0A2P5DTQ4 Arabinogalactan peptide1.9e-0556.92Show/hide
Query:  ATLSNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        A+ SN SL+ L+A+I  V SV     A EAPAPSP SPA++I+PS LSACLAA ++L FGS +R+
Subjt:  ATLSNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide1.9e-0558.06Show/hide
Query:  SNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        SN SL+ L+A+I  V SV     A EAPAPSP SPA++I+PS LSACLAA ++L FGS +R+
Subjt:  SNVSLMALIAIIFAVASVA----AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

Q96504 CRG161.1e-0556.25Show/hide
Query:  MATLSNVSLMALIAIIFAVASVA---AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLR
        MA +S VS MAL+A++FAV SVA   + E+PAP P SPA S+ PS+  AC+ AFL+L FGS L+
Subjt:  MATLSNVSLMALIAIIFAVASVA---AQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLR

SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 157.7e-0447.46Show/hide
Query:  LSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        +S  S++ L+ +I +V + A  EAPAPSPTS +++I+ S +SA +AA  +L FGS LRI
Subjt:  LSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI

Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 155.5e-0547.46Show/hide
Query:  LSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI
        +S  S++ L+ +I +V + A  EAPAPSPTS +++I+ S +SA +AA  +L FGS LRI
Subjt:  LSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCCTCTCCAATGTTTCTCTCATGGCTCTCATTGCCATCATCTTCGCCGTTGCCTCCGTCGCAGCTCAGGAGGCTCCGGCTCCCAGTCCAACCTCCCCTGCCAC
CTCCATTGCTCCTTCGGTCCTCTCCGCTTGCCTTGCTGCCTTCCTTTCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCCTCTCCAATGTTTCTCTCATGGCTCTCATTGCCATCATCTTCGCCGTTGCCTCCGTCGCAGCTCAGGAGGCTCCGGCTCCCAGTCCAACCTCCCCTGCCAC
CTCCATTGCTCCTTCGGTCCTCTCCGCTTGCCTTGCTGCCTTCCTTTCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
Protein sequenceShow/hide protein sequence
MATLSNVSLMALIAIIFAVASVAAQEAPAPSPTSPATSIAPSVLSACLAAFLSLAFGSTLRI