| GenBank top hits | e value | %identity | Alignment |
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| XP_022955856.1 sm-like protein LSM1B [Cucurbita moschata] | 8.9e-25 | 65.22 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
MC+FD GN V+E+AFERIV NQYCD PMG LLV+R +N + IGE+D P+LPPHIT++ LPQIL ARKAE +S LKR LK WMEELL+
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| XP_022980750.1 sm-like protein LSM1B [Cucurbita maxima] | 1.2e-24 | 64.13 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
MC+FD +GN+V+E+AFERI NQYCD PMG LLV+R +N I IGE+D P+LPPHIT++ LPQIL ARKAE S V KR LK WMEEL +
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| XP_023527036.1 sm-like protein LSM1B isoform X1 [Cucurbita pepo subsp. pepo] | 4.1e-22 | 67.06 | Show/hide |
Query: GNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
GN V+E+AFERIV NQYCD PMG LLV+R +N I IGE+D P+LPPHIT++ LPQIL ARKAE +S LKR LK WMEELL+
Subjt: GNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| XP_023527037.1 sm-like protein LSM1B isoform X2 [Cucurbita pepo subsp. pepo] | 4.0e-25 | 66.3 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
MC+FD GN V+E+AFERIV NQYCD PMG LLV+R +N I IGE+D P+LPPHIT++ LPQIL ARKAE +S LKR LK WMEELL+
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| XP_038894529.1 sm-like protein LSM1B [Benincasa hispida] | 4.1e-30 | 75.53 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLEDM
M SFD FG IVLE+AFERI+V N+YCDNP+G LLV+RAENIILIGE DP LPQLPPH+T + LPQILTARKAER+S+ L+R LK WMEELLED+
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLEDM
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S2YVC7 U6 snRNA-associated Sm-like protein LSm1 | 2.1e-16 | 56.82 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A ER+VVG+ YCD P+G L VIR EN++LIGELD +LPPH+T +P +IL A+KAERD+ LK ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| A0A2I4FXB3 U6 snRNA-associated Sm-like protein LSm1 | 7.3e-17 | 52.22 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
+CSFD F N+VL+ A ER++VG+ YCD P+G L VIR EN++LIGEL+ +LPPH+T +P+ +I A+KAERD+ LK +++ ME L
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| A0A5N6QJM3 U6 snRNA-associated Sm-like protein LSm1 | 6.2e-16 | 52.22 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
+CSFD F N+VL+ A ER++VG+ YCD P+G L VIR EN++LIGELD +LPPH+T + +I A+KAERD+ LK +++ ME L
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| A0A6J1GV01 sm-like protein LSM1B | 4.3e-25 | 65.22 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
MC+FD GN V+E+AFERIV NQYCD PMG LLV+R +N + IGE+D P+LPPHIT++ LPQIL ARKAE +S LKR LK WMEELL+
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| A0A6J1IXE4 sm-like protein LSM1B | 5.6e-25 | 64.13 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
MC+FD +GN+V+E+AFERI NQYCD PMG LLV+R +N I IGE+D P+LPPHIT++ LPQIL ARKAE S V KR LK WMEEL +
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEELLE
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| SwissProt top hits | e value | %identity | Alignment |
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| P87173 U6 snRNA-associated Sm-like protein LSm1 | 4.7e-05 | 45.65 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELD
SFD F N++L+ ERI V + Y D G + ++R EN++L+GELD
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELD
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| Q54W83 Probable U6 snRNA-associated Sm-like protein LSm1 | 6.6e-07 | 48.98 | Show/hide |
Query: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDP
M +FD F NIVL+ ERI VG+ Y D +G L IR +N++++GE+DP
Subjt: MCSFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDP
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| Q8LFL8 Sm-like protein LSM1B | 6.0e-16 | 50 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A ER++VG QYCD P+G L VIR EN++LIGELD +LPPH+ + +I A+K ER++ L+ ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| Q945P8 Sm-like protein LSM1A | 4.1e-17 | 48.86 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A+ER++VG+ YCD P+G L +IR EN++LIGELD +LP H+ +P +I A+KAE++ ++LK ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G19120.1 Small nuclear ribonucleoprotein family protein | 2.9e-18 | 48.86 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A+ER++VG+ YCD P+G L +IR EN++LIGELD +LP H+ +P +I A+KAE++ ++LK ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 4.2e-17 | 50 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A ER++VG QYCD P+G L VIR EN++LIGELD +LPPH+ + +I A+K ER++ L+ ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 4.2e-17 | 50 | Show/hide |
Query: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
SFD F N VLE A ER++VG QYCD P+G L VIR EN++LIGELD +LPPH+ + +I A+K ER++ L+ ++ ME L
Subjt: SFDHFGNIVLETAFERIVVGNQYCDNPMGPLLVIRAENIILIGELDPWLPQLPPHITSLPLPQILTARKAERDSLVLKRNLKVWMEEL
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