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PI0007998 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0007998
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr01:18909332..18909661
RNA-Seq ExpressionPI0007998
SyntenyPI0007998
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]5.4e-3479.59Show/hide
Query:  DKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM
        +KY+FQHATIKH+KEWF ENGYLQDIDQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNASTSSKS SS +QED+E   PEYDL++PFLDSQPM
Subjt:  DKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM

KAA0034823.1 hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]1.9e-3984.4Show/hide
Query:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLN
        ML KNLKIK W+KYNFQHATIKH+KEWFAEN YLQDIDQ+KN EFLNDKSKLL ALAQATTDADFQRLLSTAVNAS+SSKS SSSIQED+E   PEYDL+
Subjt:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLN

Query:  DPFLDSQPM
        D  LDSQPM
Subjt:  DPFLDSQPM

KAA0059031.1 polyprotein [Cucumis melo var. makuwa]6.0e-2589.23Show/hide
Query:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADF
        +L+KNLKIKWW KYNFQHATIKH+KEWFA+NGYLQDIDQ+KN EFLNDKSKLLAALAQATTDADF
Subjt:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADF

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.0e-2074.07Show/hide
Query:  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP
        + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQED+E    EYDL+DPFLDSQP
Subjt:  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP

XP_031739746.1 uncharacterized protein LOC116403279 [Cucumis sativus]4.6e-1775.36Show/hide
Query:  VKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST
        VK + +K + K   +HATIKHMKEWFAEN YLQDIDQ+KN EFLNDKSKLLA LAQATTD +FQRLLST
Subjt:  VKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST

TrEMBL top hitse value%identityAlignment
A0A0A0KYU0 Uncharacterized protein2.2e-1775.36Show/hide
Query:  VKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST
        VK + +K + K   +HATIKHMKEWFAEN YLQDIDQ+KN EFLNDKSKLLA LAQATTD +FQRLLST
Subjt:  VKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST

A0A5A7SNT5 Uncharacterized protein2.6e-3479.59Show/hide
Query:  DKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM
        +KY+FQHATIKH+KEWF ENGYLQDIDQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNASTSSKS SS +QED+E   PEYDL++PFLDSQPM
Subjt:  DKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM

A0A5A7SWC0 Uncharacterized protein9.3e-4084.4Show/hide
Query:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLN
        ML KNLKIK W+KYNFQHATIKH+KEWFAEN YLQDIDQ+KN EFLNDKSKLL ALAQATTDADFQRLLSTAVNAS+SSKS SSSIQED+E   PEYDL+
Subjt:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLN

Query:  DPFLDSQPM
        D  LDSQPM
Subjt:  DPFLDSQPM

A0A5A7UZX0 Polyprotein2.9e-2589.23Show/hide
Query:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADF
        +L+KNLKIKWW KYNFQHATIKH+KEWFA+NGYLQDIDQ+KN EFLNDKSKLLAALAQATTDADF
Subjt:  MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADF

A0A5D3BI61 Uncharacterized protein9.7e-2174.07Show/hide
Query:  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP
        + +NG LQDIDQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN S+SSK A S IQED+E    EYDL+DPFLDSQP
Subjt:  FAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATAT
CGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCATTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAA
ATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATAT
CGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCATTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAA
ATGCCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPM