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PI0008029 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008029
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr03:13615035..13615328
RNA-Seq ExpressionPI0008029
SyntenyPI0008029
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D3DR17 Retrotransposon gag protein5.6e-0452.31Show/hide
Query:  SALKR-KEEKKQMLADMSEQVEGLPAKYKAL-EPERDDLEVIAEELEDELEAMSPIDEGPPPKKQ
        +A+KR KE+KK++LA +SEQVE LPAK KA+ E E + L+V+AEEL++EL+A+SP++    P+ +
Subjt:  SALKR-KEEKKQMLADMSEQVEGLPAKYKAL-EPERDDLEVIAEELEDELEAMSPIDEGPPPKKQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAACTCTCCAAAGTTTCCTTCGCCAAGACACAGAAGACGATCGAGGCGTTCGAATCGGCCTTAAAAAGGAAGGAAGAGAAGAAGCAAATGCTCGCGGACATGAG
CGAGCAAGTGGAGGGACTTCCTGCGAAGTACAAGGCCTTGGAACCGGAGAGAGACGACCTCGAGGTCATTGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAA
TTGATGAAGGGCCACCGCCTAAGAAACAAAGGGAGGTCGCCGAACCATCTAGAAGCAAAAAGAGAGTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAACTCTCCAAAGTTTCCTTCGCCAAGACACAGAAGACGATCGAGGCGTTCGAATCGGCCTTAAAAAGGAAGGAAGAGAAGAAGCAAATGCTCGCGGACATGAG
CGAGCAAGTGGAGGGACTTCCTGCGAAGTACAAGGCCTTGGAACCGGAGAGAGACGACCTCGAGGTCATTGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAA
TTGATGAAGGGCCACCGCCTAAGAAACAAAGGGAGGTCGCCGAACCATCTAGAAGCAAAAAGAGAGTTGGGTGA
Protein sequenceShow/hide protein sequence
MDKLSKVSFAKTQKTIEAFESALKRKEEKKQMLADMSEQVEGLPAKYKALEPERDDLEVIAEELEDELEAMSPIDEGPPPKKQREVAEPSRSKKRVG