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PI0008064 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008064
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr11:20386263..20386541
RNA-Seq ExpressionPI0008064
SyntenyPI0008064
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039061.1 uncharacterized protein E6C27_scaffold84G001570 [Cucumis melo var. makuwa]1.4e-2258.24Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVYN
        M E+E+I+ YN R+L+IAN+S  LGEK+S+ K+V+K+LRSLP++F+MKVT IEE  DI+T+KLDELFGSL TFE+T+ ++   KGK + +N
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVYN

KAA0046862.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.1e-2360Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M E+ES++DYN R+L+IANES  LGEK+ D K+V+KVLRSLP++F++KVT IEE +DI+T+KLDELFGSL TFE+   ++   KGKR+ +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

KAA0052224.1 gag-pol polyprotein [Cucumis melo var. makuwa]9.6e-2464.44Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M +EE IA+YNVR+L+IANESF LGEK+ + KLV+KVLRSLP +F+MKVTTIEE +DI+T+KLDELFGSL TFE+ +  + D KGK + +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

KAA0055019.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.4e-2273.42Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDE
        M EEE+IA++NVR+LDI NES  L EK+SD KLV KVLRSLP +FNMKVTTIEE ND+S MKLDELFGSLCTFE+ L +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDE

KAA0066403.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.6e-2361.11Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M E+ES++DYN R+L+I NES  LGE++ D K+V+KVLRSLPK+F+MKVT IEED+DI+T+KLDELFGSL TFE+T  ++   KGK + +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

TrEMBL top hitse value%identityAlignment
A0A5A7TBR7 Integrase catalytic domain-containing protein6.7e-2358.24Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVYN
        M E+E+I+ YN R+L+IAN+S  LGEK+S+ K+V+K+LRSLP++F+MKVT IEE  DI+T+KLDELFGSL TFE+T+ ++   KGK + +N
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVYN

A0A5A7TTT8 Gag-pol polyprotein3.9e-2360Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M E+ES++DYN R+L+IANES  LGEK+ D K+V+KVLRSLP++F++KVT IEE +DI+T+KLDELFGSL TFE+   ++   KGKR+ +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

A0A5A7UA40 Gag-pol polyprotein4.6e-2464.44Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M +EE IA+YNVR+L+IANESF LGEK+ + KLV+KVLRSLP +F+MKVTTIEE +DI+T+KLDELFGSL TFE+ +  + D KGK + +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

A0A5A7UNH8 Gag-pol polyprotein1.1e-2273.42Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDE
        M EEE+IA++NVR+LDI NES  L EK+SD KLV KVLRSLP +FNMKVTTIEE ND+S MKLDELFGSLCTFE+ L +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDE

A0A5A7VE51 Gag-proteinase polyprotein7.9e-2461.11Show/hide
Query:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY
        M E+ES++DYN R+L+I NES  LGE++ D K+V+KVLRSLPK+F+MKVT IEED+DI+T+KLDELFGSL TFE+T  ++   KGK + +
Subjt:  MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGAAGAATCCATTGCTGACTATAATGTTCGTATTCTTGATATTGCAAATGAATCTTTTTTTCTTGGTGAGAAATTGTCTGATGAAAAACTTGTCAAAAAGGT
TCTCCGATCTCTACCGAAGCGATTCAACATGAAGGTGACAACCATAGAAGAAGACAATGATATATCAACAATGAAGCTAGACGAACTATTTGGATCTTTATGTACATTTG
AATTAACCTTAGATGAAAAGGTTGATTTGAAAGGAAAAAGGTTGGTTTACAATCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGAAGAATCCATTGCTGACTATAATGTTCGTATTCTTGATATTGCAAATGAATCTTTTTTTCTTGGTGAGAAATTGTCTGATGAAAAACTTGTCAAAAAGGT
TCTCCGATCTCTACCGAAGCGATTCAACATGAAGGTGACAACCATAGAAGAAGACAATGATATATCAACAATGAAGCTAGACGAACTATTTGGATCTTTATGTACATTTG
AATTAACCTTAGATGAAAAGGTTGATTTGAAAGGAAAAAGGTTGGTTTACAATCTGTAG
Protein sequenceShow/hide protein sequence
MLEEESIADYNVRILDIANESFFLGEKLSDEKLVKKVLRSLPKRFNMKVTTIEEDNDISTMKLDELFGSLCTFELTLDEKVDLKGKRLVYNL