CuGenDBv2

Gene ID	PI0008065
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	50S ribosomal protein L32, chloroplastic
Genome location	chr10:19498221..19500549
RNA-Seq Expression	PI0008065
Synteny	PI0008065
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002677 - Ribosomal protein L32p IPR011332 - Zinc-binding ribosomal protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004135164.1 uncharacterized protein LOC101216290 [Cucumis sativus]

2.0e-62

89.78

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRIMRALE   GSMLGLKAMA GL HSSPISGVM PK+SPPPLVLPEFNQE D+DK NN SIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
        ALKPIPVI+RCK CGKVKLPHYYCCSGRPG+QDNSAT
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT

XP_008446396.1 PREDICTED: uncharacterized protein LOC103489153 [Cucumis melo]

1.3e-61

91.24

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRIMRALE  TGSMLGLKAMA GL HSS   GVM PK+SPPPLVLPEFNQESDED+INN SIVGFGFPSL FSGSMELMAVPKKKVSPHKRRIRNAPK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
        ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT

XP_022968104.1 uncharacterized protein LOC111467436 [Cucurbita maxima]

2.2e-56

83.82

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRI+RA+E  TGSM GLKAMA  L HSSPISG+MD K+S PPLVLPEFN ESD D INN SIVGFGFPSLSFSGSMELMAVPK+KVSPHKR IRN PK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA
        ALKPIPVIIRCK CGKVKLPH+YCCSGR GEQDNSA
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA

XP_023541204.1 uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo]

6.3e-56

82.35

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRI+RA+E  TGSM GLKAM   L HSSPISG+MD K+S PPLVLPEFN ESD D+INN SIVGFGFPSLSFSGSMELMAVPK+K SPHKR IRN PK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA
        ALKPIPVIIRCK CGKVKLPH+YCCSGR GEQDNSA
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA

XP_038891873.1 uncharacterized protein LOC120081238 [Benincasa hispida]

5.7e-57

83.09

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRI+RALE+ TGSMLGLK MAN L HSSPISG++D K+S PPLVLPEFNQESD+D+INN SI+G GFP+LSFSGSMELMAVPKKKVSP+KR IRN PK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA
        ALKPIPVI+RCK CGKVKLPHYYCCSGR GEQDNSA
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQP7 50S ribosomal protein L32, chloroplastic

9.9e-63

89.78

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRIMRALE   GSMLGLKAMA GL HSSPISGVM PK+SPPPLVLPEFNQE D+DK NN SIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
        ALKPIPVI+RCK CGKVKLPHYYCCSGRPG+QDNSAT
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT

A0A1S3BEG9 50S ribosomal protein L32, chloroplastic

6.4e-62

91.24

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRIMRALE  TGSMLGLKAMA GL HSS   GVM PK+SPPPLVLPEFNQESDED+INN SIVGFGFPSL FSGSMELMAVPKKKVSPHKRRIRNAPK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
        ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT

A0A5A7SYB6 50S ribosomal protein L32, chloroplastic

6.4e-62

91.24

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRIMRALE  TGSMLGLKAMA GL HSS   GVM PK+SPPPLVLPEFNQESDED+INN SIVGFGFPSL FSGSMELMAVPKKKVSPHKRRIRNAPK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
        ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSAT

A0A6J1G1I2 50S ribosomal protein L32, chloroplastic

4.4e-55

81.62

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRI+RA+E  TGSM GLKAMAN L HSSPI+G++  K+S PPLVLPEFN ESD D INN SIVGFGFPSLSFSGSMELMAVPK+K SPHKR IRN PK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA
        ALKPIPVIIRCK CGKVKLPH+YCCSGR GEQDNSA
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA

A0A6J1HYN6 50S ribosomal protein L32, chloroplastic

1.1e-56

83.82

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Query:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK
        MALRI+RA+E  TGSM GLKAMA  L HSSPISG+MD K+S PPLVLPEFN ESD D INN SIVGFGFPSLSFSGSMELMAVPK+KVSPHKR IRN PK
Subjt:  MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPK

Query:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA
        ALKPIPVIIRCK CGKVKLPH+YCCSGR GEQDNSA
Subjt:  ALKPIPVIIRCKGCGKVKLPHYYCCSGRPGEQDNSA

SwissProt top hits

e value

%identity

Alignment

Q2N923 50S ribosomal protein L32

3.4e-04

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Query:  MAVPKKKVSPHKRRIRNAPKALKPIPVIIRCKGCGKVKLPHYYC
        MAVPK+KVSPH+R  R A  +LK +     C  CG++K PH  C
Subjt:  MAVPKKKVSPHKRRIRNAPKALKPIPVIIRCKGCGKVKLPHYYC

Arabidopsis top hits

e value

%identity

Alignment

AT1G26740.1 Ribosomal L32p protein family

7.5e-31

51.94

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Query:  MALRI--MRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNA
        MALR+  ++     +  +L  +++++  +  SP++G  D   S PPLVLPEF+Q  ++  +      GFG PS +F+GSMELMAVPKKK+S HKR IRN 
Subjt:  MALRI--MRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNA

Query:  PKALKPIPVIIRCKGCGKVKLPHYYCCSG
        PKALKP+PVIIRC+ CG+VKLPH++CCSG
Subjt:  PKALKPIPVIIRCKGCGKVKLPHYYCCSG

AT1G69485.1 Ribosomal L32p protein family

7.1e-21

73.77

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Query:  MELMAVPKKKVSPHKRRIRNAPKALKPIPVIIRCKGCGKVKLPHYYCCSGR---PGEQDNS
        MELMAVPKKK+S HKR IRN PKA KP PVIIRC+ CG+VKLPH+YCCSG    P EQ NS
Subjt:  MELMAVPKKKVSPHKRRIRNAPKALKPIPVIIRCKGCGKVKLPHYYCCSGR---PGEQDNS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTGAGGATTATGAGGGCGCTCGAGAGTCATACGGGTTCTATGCTAGGGCTCAAAGCGATGGCTAATGGTTTATCCCATTCTTCGCCGATATCTGGGGTCATGGA
CCCTAAGAATTCCCCGCCCCCGCTCGTTCTTCCGGAGTTCAACCAGGAATCTGATGAAGATAAAATCAACAACGGCAGTATTGTGGGATTTGGTTTCCCCAGCTTATCTT
TTTCCGGGTCTATGGAGCTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGCGCATAAGAAATGCTCCAAAGGCTCTAAAACCTATTCCGGTTATAATTCGG
TGCAAGGGTTGTGGTAAGGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGACCAGGGGAACAGGACAATTCAGCGACATGA

mRNA sequence

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GGCATTTGCAAATTCCTAAACCCCGTCGTCTTCTCAGTCTGATTTCCACCGCCGGTATACTGAAATCAGCATTGGCACTTGGACTTGCTCGCAGCTATGGCGTTGAGGAT
TATGAGGGCGCTCGAGAGTCATACGGGTTCTATGCTAGGGCTCAAAGCGATGGCTAATGGTTTATCCCATTCTTCGCCGATATCTGGGGTCATGGACCCTAAGAATTCCC
CGCCCCCGCTCGTTCTTCCGGAGTTCAACCAGGAATCTGATGAAGATAAAATCAACAACGGCAGTATTGTGGGATTTGGTTTCCCCAGCTTATCTTTTTCCGGGTCTATG
GAGCTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGCGCATAAGAAATGCTCCAAAGGCTCTAAAACCTATTCCGGTTATAATTCGGTGCAAGGGTTGTGG
TAAGGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGACCAGGGGAACAGGACAATTCAGCGACATGAGGCTATGGAGAGTAAAAAGGGCAGGCTGAAAGAAATGTCT
TCAGTTATAGAATCCTCCCCATACCTGGGAGCTATAGTTTCCTTTTGAGTATTCTTCTTTATTAGATTCTTGAAGTTTCGGTTCTTCTGCTCATTGTATGACAGATTGTT
AGATTTCATGTTATAACCATTAACTAGCTGTTGAGCCATATCCTTACTTTGTGCTATCCAGCAGACTTCAATTCTTCCAGGTCTGAAATGCGACTGTTTTAGCATATGTT
TTTCTTTCTTAAATGCGACCTTATTGTATCATGATAAATAGATATAGATAGTAGTCTATCTTGATCTATCACGGTCCGTTGTAAATAGACTGTGATATTTTGCTATATCT
TATAAATATTTTGGTTCGTACTTTTTTTAGTTA

Protein sequence

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MALRIMRALESHTGSMLGLKAMANGLSHSSPISGVMDPKNSPPPLVLPEFNQESDEDKINNGSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIPVIIR
CKGCGKVKLPHYYCCSGRPGEQDNSAT

PI0008065 (gene) of Melon (PI 482460) v1 genome