| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0051933.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 5.4e-40 | 68.7 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WPIP+ V+++QAF+GLASFYRKFI F I PI DCLKKGSF G K+QDSF+++KEKLS++P+L+LPDFS P EVAVDACG IG LSQ GHP+EFF
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKL SRQ W+TYE
Subjt: SEKLSNSRQAWNTYE
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| KAA0057262.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.1e-35 | 66.96 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
W + V+ +QAFLGLASFYRKFI+ FS I PITDCLKKG+F G KQQ SF+++KE LS+SPVLKL DFS EVAVDACG IG V+SQQGH + +F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKLS SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| KAA0062943.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa] | 1.3e-36 | 64.35 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WP P+ ++++QAFLGLASFY++FI+ FS I TP+TD LKK +F QQ SF+ IK +L+SSP+L+LPDF++P EV VDACGI IG VLSQQGHP+E+F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKLS SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| TYK06567.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 4.0e-35 | 64.35 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WPIP ++++QAFLGLASFYRKFI FS I ITDCLKKG F G+KQQDSF+ +K+KLS+ PVLKLP F+ P EV VDA G VLSQ GHP+E+F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKL+ SRQ +TYE
Subjt: SEKLSNSRQAWNTYE
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| TYK23247.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 6.7e-38 | 63.48 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WP P+ ++++QAFLGLASFY+KFI+ FS I P+TDCLKKG+F Q+QQ+SF+ IK + +SSP+L+LPDF++P EV VDACG IG VLSQQGHP+++F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
+EKLS+SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V4G7 Retrovirus-related Pol polyprotein from transposon 17.6 | 6.1e-37 | 64.35 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WP P+ ++++QAFLGLASFY++FI+ FS I TP+TD LKK +F QQ SF+ IK +L+SSP+L+LPDF++P EV VDACGI IG VLSQQGHP+E+F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKLS SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| A0A5D3C402 DNA/RNA polymerases superfamily protein | 2.0e-35 | 64.35 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WPIP ++++QAFLGLASFYRKFI FS I ITDCLKKG F G+KQQDSF+ +K+KLS+ PVLKLP F+ P EV VDA G VLSQ GHP+E+F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKL+ SRQ +TYE
Subjt: SEKLSNSRQAWNTYE
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| A0A5D3CPI6 Putative gag-pol polyprotein | 2.6e-40 | 68.7 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WPIP+ V+++QAF+GLASFYRKFI F I PI DCLKKGSF G K+QDSF+++KEKLS++P+L+LPDFS P EVAVDACG IG LSQ GHP+EFF
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKL SRQ W+TYE
Subjt: SEKLSNSRQAWNTYE
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| A0A5D3D575 Putative gag-pol polyprotein | 5.1e-36 | 66.96 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
W + V+ +QAFLGLASFYRKFI+ FS I PITDCLKKG+F G KQQ SF+++KE LS+SPVLKL DFS EVAVDACG IG V+SQQGH + +F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
SEKLS SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| A0A5D3DHV3 Putative gag-pol polyprotein | 3.2e-38 | 63.48 | Show/hide |
Query: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
WP P+ ++++QAFLGLASFY+KFI+ FS I P+TDCLKKG+F Q+QQ+SF+ IK + +SSP+L+LPDF++P EV VDACG IG VLSQQGHP+++F
Subjt: WPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPLEFF
Query: SEKLSNSRQAWNTYE
+EKLS+SRQ+W+TYE
Subjt: SEKLSNSRQAWNTYE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.4e-19 | 39.83 | Show/hide |
Query: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFF--LGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPL
++PIP+K ++I+AFLGL +YRKFI F+ I P+T CLKK + +F +K +S P+LK+PDF+ + DA +++G VLSQ GHPL
Subjt: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFF--LGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHPL
Query: EFFSEKLSNSRQAWNTYE
+ S L+ ++T E
Subjt: EFFSEKLSNSRQAWNTYE
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| P10273 Gag-Pol polyprotein | 9.4e-11 | 33.91 | Show/hide |
Query: PIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFF-LGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQ----GHP
P+P R ++ FLG A + R +I F+ + P+ + G+ F G +QQ +F+ IK+ L SSP L LPD + P E+ +D GVL Q+ P
Subjt: PIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFF-LGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQ----GHP
Query: LEFFSEKLSNSRQAW
+ + S+KL W
Subjt: LEFFSEKLSNSRQAW
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.8e-15 | 37.98 | Show/hide |
Query: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCL------------KKGSFFLGQKQQDSFDIIKEKLSSSPV-LKLPDFSTPSEVAVDACGISI
++P P V +++FLGLAS+YR FIK F+ I PITD L KK + Q+++F ++ L+S V LK PDF P ++ DA I
Subjt: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCL------------KKGSFFLGQKQQDSFDIIKEKLSSSPV-LKLPDFSTPSEVAVDACGISI
Query: GGVLSQQGHPLEFFSEKLSNSRQAWNTYE
G VLSQ+G P+ S L Q + T E
Subjt: GGVLSQQGHPLEFFSEKLSNSRQAWNTYE
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.2e-19 | 38.66 | Show/hide |
Query: MQWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQ--DSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHP
+ +PIP+K ++I+AFLGL +YRKFI ++ I P+T CLKK + QK + ++F+ +K + P+L+LPDF + DA +++G VLSQ GHP
Subjt: MQWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLKKGSFFLGQKQQ--DSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIGGVLSQQGHP
Query: LEFFSEKLSNSRQAWNTYE
+ F S L++ ++ E
Subjt: LEFFSEKLSNSRQAWNTYE
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 3.2e-11 | 29.55 | Show/hide |
Query: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLK------------KGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIG
+ P P+ V++++ FLG+ S+YRKFI+ ++ + P+T+ + K L + SF+ +K L SS +L P F+ P + DA +IG
Subjt: QWPIPSKVRDIQAFLGLASFYRKFIKKFSLITTPITDCLK------------KGSFFLGQKQQDSFDIIKEKLSSSPVLKLPDFSTPSEVAVDACGISIG
Query: GVLSQ----QGHPLEFFSEKLSNSRQAWNTYE
VLSQ + P+ + S L+ + + + T E
Subjt: GVLSQ----QGHPLEFFSEKLSNSRQAWNTYE
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