; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008111 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008111
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr05:11491846..11493532
RNA-Seq ExpressionPI0008111
SyntenyPI0008111
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.6e-9846.19Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]2.5e-9946.43Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]9.5e-9945.56Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MS + YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP
         N      ++ +S+ + D+L    Y   D+NDPFLD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.6e-9845.95Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]4.3e-9946.43Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein1.2e-9946.43Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7SS94 Retrotransposable element Tf27.9e-9946.19Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7U3G5 Polyprotein4.6e-9945.56Show/hide
Query:  STSSKGSRPSSSQNPAPSPMSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MS + YAMD  F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V 
Subjt:  STSSKGSRPSSSQNPAPSPMSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTH
        P K F PRP I  YF K  ++ D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++
Subjt:  PEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTH

Query:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF P SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV-----

Query:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP
         N      ++ +S+ + D+L    Y   D+NDPFLD+QP
Subjt:  -NASTSSKSASSSIQEDDELASPEY---DLNDPFLDSQP

A0A5A7V6D1 Retrotransposable element Tf27.9e-9945.95Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5D3DW87 Polyprotein2.1e-9946.43Show/hide
Query:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV
        MS + YAMD  F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S   S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSVDQYAMDFGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSRLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQV

Query:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS
        ++ D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKND SKI YSKL+IF+ + P++W QG+F  + FS PF P S
Subjt:  VIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSKPFVPQS

Query:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + D+
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAV------NASTSSKSASSSIQEDDE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAGATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CAGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCTATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAACCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGTCGATTTTCAAAGATTGCTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTAAATGT
TGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCAGTAAGTCGCA
AGATTTGGCGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGTAGATCAATATGC
AATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAGATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTACTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGGAAATTTTACGAGTTTATTCTAGTAGACACAAAGTCTGTAGAAATAACTCACGTGC
CAGATAAAAACGATGCTTCAAAAATCGCTTATTCAAAATTAAAAATTTTCAAAGCGATAAATCCAACCCATTGGAACCAAGGAATTTTTACAGAAAAATCCTTTTCAAAA
CCTTTCGTACCTCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGC
CTACAAGATAAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCTATTCAAGAGTCATATTTTTATTTCACAAGAA
CAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTCAACACAGCTTCATATCCACAATACAAGATG
TTAGTCAAAAACCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATCAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGA
TCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCAAAACTTTTAGCAGCACTGGCACAGGCAACAACTGATGTCGATTTTCAAAGATTGCTATCAACGGCAGTAAATG
CCTCTACAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGACGAATTGGCAAGTCCGGAATACGATCTAAATGATCCGTTCCTCGACTCACAGCCCATTAAATGT
TGTTCCGTCATCCAGAAATCCAGGCGAAAAATGAAGACAACAAAGCTTCAAGAAATTGCGTATTTCATGGAGTATTCGACTACGTTAGATGGTCCCGGCAGTAAGTCGCA
AGATTTGGCGCGGTGA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSVDQYAMDFGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSRLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDASKIAYSKLKIFKAINPTHWNQGIFTEKSFSK
PFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKM
LVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDVDFQRLLSTAVNASTSSKSASSSIQEDDELASPEYDLNDPFLDSQPIKC
CSVIQKSRRKMKTTKLQEIAYFMEYSTTLDGPGSKSQDLAR