; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008129 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008129
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBEST Arabidopsis thaliana protein match is: embryo defective 1303 .
Genome locationchr06:27390972..27394070
RNA-Seq ExpressionPI0008129
SyntenyPI0008129
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0010027 - thylakoid membrane organization (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR040299 - Protein FERTILITY RESTORER RF2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148272.1 protein FERTILITY RESTORER RF2, mitochondrial [Cucumis sativus]3.8e-8290.23Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTTNSG+MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKPI ST TKGG+LCSSRK+NAFICFAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLG LKDKE +GSY++DRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

XP_008448993.1 PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo]6.8e-8795.4Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTTNS  MLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPI STGTKGGILCSSRK++ FIC AALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG YQDDRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

XP_022965198.1 uncharacterized protein LOC111465127 [Cucurbita maxima]6.8e-7989.71Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT
        MEMLTTNSG+ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPI STGTKGG L S+RK +NAFICFAALNARCAAEQTQTVT
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSY+DDRRR
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

XP_023553392.1 uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-7989.14Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT
        MEMLTT+SG+ML LLPPVGQHWG+MKAKD  LRR S Q QTPNGRRQS+ AKAGPVFLKPI STGTKGG+L S+RK +NAFICFAALNARCAAEQTQTVT
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG+Y+DDRRR
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

XP_038905031.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida]5.5e-8191.38Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTT+SG+MLPLLPPVGQH GRMKAKDL LRRYSSQ QT NGRRQS+FAKAGPVFLKPI STG KGG LCSSR++NAF+CFAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG YQ+DRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2P2 Uncharacterized protein1.9e-8290.23Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTTNSG+MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKPI ST TKGG+LCSSRK+NAFICFAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLG LKDKE +GSY++DRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

A0A1S4DXD8 uncharacterized protein LOC1034909993.3e-8795.4Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTTNS  MLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPI STGTKGGILCSSRK++ FIC AALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG YQDDRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

A0A6J1F258 uncharacterized protein LOC1114387811.2e-7888.57Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT
        MEMLTT+SG+ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPI STGTKGG+L S+RK +NAFICFAALNARCAAEQTQTVT
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG+Y+DDRRR
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

A0A6J1HQC3 uncharacterized protein LOC1114651273.3e-7989.71Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT
        MEMLTTNSG+ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKPI STGTKGG L S+RK +NAFICFAALNARCAAEQTQTVT
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRK-DNAFICFAALNARCAAEQTQTVT

Query:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSY+DDRRR
Subjt:  REAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

A0A6J1KZM4 uncharacterized protein LOC111498519 isoform X12.9e-7585.63Show/hide
Query:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR
        MEMLTTNSG+MLPLLPPVGQHWGRMKA +  L R S Q +T NGRRQ + AKAGP+++KPI STGT GG+L SSRK+NAFICFAALNARCAAEQTQTVTR
Subjt:  MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTR

Query:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE  YQ+DRRR
Subjt:  EAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

SwissProt top hitse value%identityAlignment
F1SZ41 Protein FERTILITY RESTORER RF2, mitochondrial8.5e-0849.4Show/hide
Query:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE
        + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Subjt:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE

F1SZ42 Protein FERTILITY RESTORER RF2, mitochondrial8.5e-0849.4Show/hide
Query:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE
        + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Subjt:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE

F1SZ44 Protein FERTILITY RESTORER RF2, mitochondrial5.0e-0849.4Show/hide
Query:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE
        + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP   G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Subjt:  NARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE

Q0E3V2 Protein YELLOW LEAF 1, choloroplastic5.0e-0843.43Show/hide
Query:  CFAALNARCAAEQTQTVTRE------APTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR
        C A++   C A QTQT  R+      +P    +  K +SP+LDDG +GFPP   G GGGGGGGGG N +GGF  F  +  L +L  +E E + Q+  RR
Subjt:  CFAALNARCAAEQTQTVTRE------APTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR

Arabidopsis top hitse value%identityAlignment
AT1G30475.1 BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1)3.5e-2564.29Show/hide
Query:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Subjt:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE

AT1G30475.2 FUNCTIONS IN: molecular_function unknown3.5e-2564.29Show/hide
Query:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Subjt:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE

AT1G30475.3 FUNCTIONS IN: molecular_function unknown3.5e-2564.29Show/hide
Query:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE
        ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPRDDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Subjt:  ILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE

AT1G56200.1 embryo defective 13037.1e-3464.71Show/hide
Query:  LKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAF
        + P+ + G   G+   SR+ +  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAF
Subjt:  LKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAF

Query:  LGFLKDKESEGSYQDDRRR
        LG LKDKE E  Y+  RRR
Subjt:  LGFLKDKESEGSYQDDRRR

AT1G56200.2 embryo defective 13037.1e-3464.71Show/hide
Query:  LKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAF
        + P+ + G   G+   SR+ +  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAF
Subjt:  LKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAF

Query:  LGFLKDKESEGSYQDDRRR
        LG LKDKE E  Y+  RRR
Subjt:  LGFLKDKESEGSYQDDRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGCTTACTACAAATTCTGGTTCGATGCTACCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGAAGGTATAGTTC
CCAACATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCAGTATTTCTTAAACCAATTCAATCTACTGGGACGAAGGGAGGCATTCTATGTTCAA
GTAGAAAGGACAATGCTTTCATTTGTTTTGCTGCTTTGAATGCTCGATGTGCAGCGGAGCAGACCCAGACTGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGC
AAGGAGAAGTCACCACAATTGGATGATGGCGATTCCGGATTTCCACCTCGAGATGACGGTGATGGTGGTGGGGGAGGTGGCGGCGGCGGAGGCAACTGGTCCGGTGGATT
CTTCTTCTTTGGGTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAAAGAAAGTGAAGGGTCATATCAGGATGATCGGAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGCTTACTACAAATTCTGGTTCGATGCTACCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGAAGGTATAGTTC
CCAACATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCAGTATTTCTTAAACCAATTCAATCTACTGGGACGAAGGGAGGCATTCTATGTTCAA
GTAGAAAGGACAATGCTTTCATTTGTTTTGCTGCTTTGAATGCTCGATGTGCAGCGGAGCAGACCCAGACTGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGC
AAGGAGAAGTCACCACAATTGGATGATGGCGATTCCGGATTTCCACCTCGAGATGACGGTGATGGTGGTGGGGGAGGTGGCGGCGGCGGAGGCAACTGGTCCGGTGGATT
CTTCTTCTTTGGGTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAAAGAAAGTGAAGGGTCATATCAGGATGATCGGAGAAGATAA
Protein sequenceShow/hide protein sequence
MEMLTTNSGSMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIQSTGTKGGILCSSRKDNAFICFAALNARCAAEQTQTVTREAPTITVLPG
KEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYQDDRRR