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PI0008156 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008156
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr09:11233897..11234481
RNA-Seq ExpressionPI0008156
SyntenyPI0008156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.0e-2763.92Show/hide
Query:  NNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+ I+SY +PNLY+FNPGIAY  FGEN  FEIK +ML M QN GQF GHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]5.7e-3466.06Show/hide
Query:  ENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPK
        +NN+  P   AA   N  Y+A D DR IRSY +PNLY+FNPGIAYP F EN RFEIK +MLQ+IQN GQF  HPR+DPH++IR+FYSICASFHMPGIS +
Subjt:  ENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPK

Query:  ELRFALFPL
        ELRF  F L
Subjt:  ELRFALFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]8.7e-3539.71Show/hide
Query:  MSDGEQPQFELDPEMERTFRRNRRRARQRQARR-MENNRNA-----------------PPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVF
        MS+G+ P F++DPE+ERTFRR  R+ +QR++ + +E N +A                    HA  + N   +AHD +R +R Y +PNLYNF PGI  P F
Subjt:  MSDGEQPQFELDPEMERTFRRNRRRARQRQARR-MENNRNA-----------------PPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVF

Query:  GENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKR
          N RFE+KP+MLQM+Q  GQF G   EDPH H++SF  IC++F M G+    +R  LFP +LRDEA++WA +++       G +  K  ++ FP +   
Subjt:  GENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKR

Query:  QKKEEAYGF
        +++ +   F
Subjt:  QKKEEAYGF

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]2.8e-2539.78Show/hide
Query:  LDPEMERTFRRNRRRARQRQARRMENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPRE
        +DPE+ERTFR+ R+  + ++   M +       H   E N   +A D  R IR Y AP     NPGI  P   +   FE+KP+M QM+Q VGQF G P E
Subjt:  LDPEMERTFRRNRRRARQRQARRMENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPRE

Query:  DPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKRQKKEEAYGF
        DPH HIRSF  +  SF + G+S + LR  LFP +LRD A+ W N     S  N   +  K   + FP +R  + + E   F
Subjt:  DPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKRQKKEEAYGF

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]2.9e-3045.96Show/hide
Query:  MSDGEQPQFELDPEMERTF--RRNRRRARQRQARRMENNRNAPPPH----AAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIM
        MS    P+FE +PE++ TF  R ++ RA +R+    +NN N  P        P  +  ++A D +  IR+Y APNLY+F+PGI+ P+  ENARFEIKP+M
Subjt:  MSDGEQPQFELDPEMERTF--RRNRRRARQRQARRMENNRNAPPPH----AAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIM

Query:  LQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANA
        +QMIQN+ QF+    E+PH H+  F  +C++F +PGI+P  +R  LFP TLRD+AKRWA++
Subjt:  LQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANA

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein2.2e-2340.94Show/hide
Query:  NAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEA
        N   +AH+L+  I  Y +P+LY FN GI YP FG NARF++KP ML MIQ   QF G+  EDP +HI+S Y +C+SFH+P +S ++L    F  TL+D+ 
Subjt:  NAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEA

Query:  KRWANAWKMASGNM----------GPINRKIYEEIFPT----SRKRQKK
        K+W    ++A              G + RK Y +I  T    SR  + K
Subjt:  KRWANAWKMASGNM----------GPINRKIYEEIFPT----SRKRQKK

A0A5A7UDN8 Uncharacterized protein5.0e-2863.92Show/hide
Query:  NNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS
        NN+N P      E N AY+AHDLD+ I+SY +PNLY+FNPGIAY  FGEN  FEIK +ML M QN GQF GHP EDP++HIR+FY ICASF+M  IS
Subjt:  NNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 12.7e-3466.06Show/hide
Query:  ENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPK
        +NN+  P   AA   N  Y+A D DR IRSY +PNLY+FNPGIAYP F EN RFEIK +MLQ+IQN GQF  HPR+DPH++IR+FYSICASFHMPGIS +
Subjt:  ENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPK

Query:  ELRFALFPL
        ELRF  F L
Subjt:  ELRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.4e-2561.62Show/hide
Query:  NNRNAPPPHAAP--ELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS
        N  N  P ++A   + N   +AH+LD  IR+Y + NLY+FN GIAY VFGENA FE+KP+MLQMIQ  GQFDG+  EDPHEHI+SFYSICASFHM   S
Subjt:  NNRNAPPPHAAP--ELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGIS

U5CUI2 Retrotrans_gag domain-containing protein1.4e-2241.26Show/hide
Query:  LNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDE
        +N   +A D  R IR Y AP     NPGI  P   +  +FE+KP+M QM+Q VGQF G P EDPH H+RSF  +  SF + G+S + LR  LFP +LRD 
Subjt:  LNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPREDPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDE

Query:  AKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKRQKKEEAYGF
        A+ W N     S  N   +  K   + FP +R  + + E   F
Subjt:  AKRWANAWKMAS-GNMGPINRKIYEEIFPTSRKRQKKEEAYGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAACCGCAATTCGAGCTTGACCCTGAAATGGAGCGAACATTTCGGCGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
CAGAAATGCCCCTCCGCCGCATGCTGCCCCAGAACTAAATGCTGCCTACATGGCACACGACTTGGATAGGCTGATTAGATCTTATGTGGCACCCAACCTCTACAACTTCA
ACCCAGGGATCGCTTATCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTATCATGCTTCAGATGATTCAGAACGTCGGACAATTCGACGGTCATCCTAGGGAG
GATCCACACGAGCATATTAGAAGTTTTTACTCCATCTGCGCTTCCTTTCACATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAGGGA
TGAGGCAAAGAGGTGGGCCAATGCTTGGAAGATGGCGAGTGGAAACATGGGACCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAACGCCAGAAGA
AGGAAGAAGCTTATGGGTTTCCAGCAGAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAACCGCAATTCGAGCTTGACCCTGAAATGGAGCGAACATTTCGGCGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
CAGAAATGCCCCTCCGCCGCATGCTGCCCCAGAACTAAATGCTGCCTACATGGCACACGACTTGGATAGGCTGATTAGATCTTATGTGGCACCCAACCTCTACAACTTCA
ACCCAGGGATCGCTTATCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTATCATGCTTCAGATGATTCAGAACGTCGGACAATTCGACGGTCATCCTAGGGAG
GATCCACACGAGCATATTAGAAGTTTTTACTCCATCTGCGCTTCCTTTCACATGCCAGGCATCTCACCTAAAGAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAGGGA
TGAGGCAAAGAGGTGGGCCAATGCTTGGAAGATGGCGAGTGGAAACATGGGACCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAACGCCAGAAGA
AGGAAGAAGCTTATGGGTTTCCAGCAGAAGGATAG
Protein sequenceShow/hide protein sequence
MSDGEQPQFELDPEMERTFRRNRRRARQRQARRMENNRNAPPPHAAPELNAAYMAHDLDRLIRSYVAPNLYNFNPGIAYPVFGENARFEIKPIMLQMIQNVGQFDGHPRE
DPHEHIRSFYSICASFHMPGISPKELRFALFPLTLRDEAKRWANAWKMASGNMGPINRKIYEEIFPTSRKRQKKEEAYGFPAEG