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PI0008176 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008176
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr06:27578704..27579887
RNA-Seq ExpressionPI0008176
SyntenyPI0008176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034016.1 hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa]1.4e-1046.05Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGL+ VA+ET    +LIEA+LK+RYNY+GF+PA + I D++      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1047.37Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEA+LK+RYNY+GF+PA + I D++      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.2e-1150Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEARLK+RYNY+GF+PA + I D++      ++  H   KW  E N+KL
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

KAA0046763.1 hypothetical protein E6C27_scaffold216G00460 [Cucumis melo var. makuwa]1.4e-1047.37Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEA++K+RYNY+GF+PA + I D D      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]5.0e-1353.95Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITD-EDEIFKHHLI-----KWFKENNLKL
        MN++ +IG+ CGGL+ V+K T RKTDLIE RLK+R+NYTGFIPA INI D +  IF    +     +WFKE N  +
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITD-EDEIFKHHLI-----KWFKENNLKL

TrEMBL top hitse value%identityAlignment
A0A5A7SVM5 DUF4283 domain-containing protein6.6e-1146.05Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGL+ VA+ET    +LIEA+LK+RYNY+GF+PA + I D++      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein8.7e-1147.37Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEA+LK+RYNY+GF+PA + I D++      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

A0A5A7TT76 Uncharacterized protein6.6e-1147.37Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEA++K+RYNY+GF+PA + I D D      ++  H   KW  E N++L
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

A0A5D3DT94 Putative amidohydrolase ytcJ2.4e-1353.95Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITD-EDEIFKHHLI-----KWFKENNLKL
        MN++ +IG+ CGGL+ V+K T RKTDLIE RLK+R+NYTGFIPA INI D +  IF    +     +WFKE N  +
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITD-EDEIFKHHLI-----KWFKENNLKL

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein3.0e-1150Show/hide
Query:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL
        M TF +IG  CGGLI VA+ET    +LIEARLK+RYNY+GF+PA + I D++      ++  H   KW  E N+KL
Subjt:  MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDED------EIFKHHLIKWFKENNLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACATTCACAAGAATTGGAAACGTTTGTGGTGGACTGATTGCTGTAGCTAAAGAAACTTGGAGGAAAACTGATTTAATTGAAGCGAGACTTAAAGTAAGATACAA
TTACACTGGTTTTATTCCGGCTTTGATCAATATCACTGATGAAGATGAAATCTTCAAACATCACCTCATAAAATGGTTTAAAGAAAACAACTTGAAGCTTTCTCCTTCTA
GCAATATGAACCCAGTTTCATCAAAAGCTAACCTTCAGGATGTTAACAAGGTTGTAACTAGCTGTGAGCCATCGGGATCAAACAGTTCCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACATTCACAAGAATTGGAAACGTTTGTGGTGGACTGATTGCTGTAGCTAAAGAAACTTGGAGGAAAACTGATTTAATTGAAGCGAGACTTAAAGTAAGATACAA
TTACACTGGTTTTATTCCGGCTTTGATCAATATCACTGATGAAGATGAAATCTTCAAACATCACCTCATAAAATGGTTTAAAGAAAACAACTTGAAGCTTTCTCCTTCTA
GCAATATGAACCCAGTTTCATCAAAAGCTAACCTTCAGGATGTTAACAAGGTTGTAACTAGCTGTGAGCCATCGGGATCAAACAGTTCCCCATGA
Protein sequenceShow/hide protein sequence
MNTFTRIGNVCGGLIAVAKETWRKTDLIEARLKVRYNYTGFIPALINITDEDEIFKHHLIKWFKENNLKLSPSSNMNPVSSKANLQDVNKVVTSCEPSGSNSSP