; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008198 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008198
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr03:15494293..15495785
RNA-Seq ExpressionPI0008198
SyntenyPI0008198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]5.7e-9074.15Show/hide
Query:  VDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVIRKY
        VDAAAGGALADKTPTEA ELI RM +NSQNFGNRA ELDN LTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKY
Subjt:  VDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKILEI
        DP+ NTYN+ WRDNPNLRWG+DNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+A+VSAISLRSGKIL+ 
Subjt:  DPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKILEI

Query:  PSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        P++ E+KVTS L+ L +K+E KEE++ET+  PS SK
Subjt:  PSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

KAA0032798.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.6e-9073.33Show/hide
Query:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV
        DRN VDAAA GALADKTP EARELI RMA+NSQNFGNRASELDNSLTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVCGLVG+PNDKCP ++E+ N+
Subjt:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK
        +R+YDPH NTYN  WRDNPNLRWG+DNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKLPAQPDH +VSAISLRSGK
Subjt:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK

Query:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        IL+ P++ E+KVTS L+ L +K++ KEE++ET+ L S SK
Subjt:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-9071.95Show/hide
Query:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AGGALADK PTEARELIS+MA+NSQ+F NRASELDNSLTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++A+VSA+SLRSGK
Subjt:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK

Query:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSKELHDEF
        IL+ P++ E+K TS  + L  K+E KEE++ET+  P  SK  +D+F
Subjt:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSKELHDEF

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.4e-9074.48Show/hide
Query:  NTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI
        NTVDAA G ALADKTPTEARELISRMAKN Q+FGNRASE DNSLTKEVSELKSQMLNM TTL TSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++
Subjt:  NTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI
        R+YDPHSNTYN+ WRDNPNLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQ DHA+VSAISLRSGKI
Subjt:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI

Query:  LEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        L+ P++ E+KVTS  + L +K+E KEE++ET+  PS SK
Subjt:  LEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.7e-9074.89Show/hide
Query:  RNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKTPTEARELISRMA+NS++FGNRASELDNSLTKEVSELKSQMLNMTTL TSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHA+VSAISLRSGKI
Subjt:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI

Query:  LEIPSS-EEKVTSTLILLKNKDEKKEEELET
        L+ P++ E+K+TS  + L +K+E KEE++++
Subjt:  LEIPSS-EEKVTSTLILLKNKDEKKEEELET

TrEMBL top hitse value%identityAlignment
A0A5A7SQH8 Retrotransposon gag protein4.7e-9073.33Show/hide
Query:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV
        DRN VDAAA GALADKTP EARELI RMA+NSQNFGNRASELDNSLTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVCGLVG+PNDKCP ++E+ N+
Subjt:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK
        +R+YDPH NTYN  WRDNPNLRWG+DNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKGKLPAQPDH +VSAISLRSGK
Subjt:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK

Query:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        IL+ P++ E+KVTS L+ L +K++ KEE++ET+ L S SK
Subjt:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

A0A5A7VQ60 Retrotransposon gag protein3.6e-9074.48Show/hide
Query:  NTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI
        NTVDAA G ALADKTPTEARELISRMAKN Q+FGNRASE DNSLTKEVSELKSQMLNM TTL TSFVQG  +KV KCGVCGLVGH N+KCP+++E+ N++
Subjt:  NTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNM-TTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI
        R+YDPHSNTYN+ WRDNPNLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQ DHA+VSAISLRSGKI
Subjt:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI

Query:  LEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        L+ P++ E+KVTS  + L +K+E KEE++ET+  PS SK
Subjt:  LEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

A0A5D3CB46 Retrotransposon gag protein2.7e-9074.89Show/hide
Query:  RNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALADKTPTEARELISRMA+NS++FGNRASELDNSLTKEVSELKSQMLNMTTL TSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI
        R+YDPHSNTYN+ WRDN NLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHA+VSAISLRSGKI
Subjt:  RKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKI

Query:  LEIPSS-EEKVTSTLILLKNKDEKKEEELET
        L+ P++ E+K+TS  + L +K+E KEE++++
Subjt:  LEIPSS-EEKVTSTLILLKNKDEKKEEELET

A0A5D3CRR8 Retrotransposon gag protein2.1e-9071.95Show/hide
Query:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AGGALADK PTEARELIS+MA+NSQ+F NRASELDNSLTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK
        +RKYDPH NTYN+ WRDNPNLRWG+DNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++A+VSA+SLRSGK
Subjt:  IRKYDPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGK

Query:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSKELHDEF
        IL+ P++ E+K TS  + L  K+E KEE++ET+  P  SK  +D+F
Subjt:  ILEIPSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSKELHDEF

E5GBZ4 Retrotransposon gag protein2.7e-9074.15Show/hide
Query:  VDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVIRKY
        VDAAAGGALADKTPTEA ELI RM +NSQNFGNRA ELDN LTKEVSELKSQMLNMTTL TSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKY
Subjt:  VDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVIRKY

Query:  DPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKILEI
        DP+ NTYN+ WRDNPNLRWG+DNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+A+VSAISLRSGKIL+ 
Subjt:  DPHSNTYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKILEI

Query:  PSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK
        P++ E+KVTS L+ L +K+E KEE++ET+  PS SK
Subjt:  PSS-EEKVTSTLILLKNKDEKKEEELETSALPSTSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGAGGTGCTTTGGCTGATAAAACCCCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTAAAAATTCACAGAATTTTGG
AAATAGGGCATCCGAGCTCGACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACAAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAGTTGTTAAGTGTGGGGTGTGCGGCCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCCCATAGCAAT
ACTTACAATGCCAGTTGGAGAGACAACCCTAATCTAAGGTGGGGAAGCGACAACCAAAGACCTTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTTTGGCTACTAACACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACGAATGCAATAAGCAAGCTAGAAGGTAAAGGTAAACTTC
CGGCTCAGCCAGATCATGCTAGTGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGGAAATCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCTTATCCTTCTAAAA
AATAAAGATGAGAAAAAGGAAGAAGAATTAGAAACTAGTGCTCTACCATCTACTTCTAAAGAATTGCATGATGAATTTGAAGAATTGCCTATTGATGTTGAATTTTCTAA
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGAGGTGCTTTGGCTGATAAAACCCCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTAAAAATTCACAGAATTTTGG
AAATAGGGCATCCGAGCTCGACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAATATGACTACTTTACAAACTTCCTTTGTGCAAGGTGGATCTG
TTAAAGTTGTTAAGTGTGGGGTGTGCGGCCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCCCATAGCAAT
ACTTACAATGCCAGTTGGAGAGACAACCCTAATCTAAGGTGGGGAAGCGACAACCAAAGACCTTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACAAATTTGGAAGA
TTTAGTTAAAGCTTTGGCTACTAACACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTGACGAATGCAATAAGCAAGCTAGAAGGTAAAGGTAAACTTC
CGGCTCAGCCAGATCATGCTAGTGTAAGTGCCATCTCACTTAGAAGTGGTAAAATTCTGGAAATCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCTTATCCTTCTAAAA
AATAAAGATGAGAAAAAGGAAGAAGAATTAGAAACTAGTGCTCTACCATCTACTTCTAAAGAATTGCATGATGAATTTGAAGAATTGCCTATTGATGTTGAATTTTCTAA
ATAA
Protein sequenceShow/hide protein sequence
MDRNTVDAAAGGALADKTPTEARELISRMAKNSQNFGNRASELDNSLTKEVSELKSQMLNMTTLQTSFVQGGSVKVVKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSN
TYNASWRDNPNLRWGSDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHASVSAISLRSGKILEIPSSEEKVTSTLILLK
NKDEKKEEELETSALPSTSKELHDEFEELPIDVEFSK