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PI0008223 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008223
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr02:13335395..13336015
RNA-Seq ExpressionPI0008223
SyntenyPI0008223
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]8.7e-0636.75Show/hide
Query:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +ESE+ T     L+ ++      D+P     Q    +A +TR P PPKQ+  P      Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QDLATKHEKQIVDLETK
        Q+   +++K + DLE K
Subjt:  QDLATKHEKQIVDLETK

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]3.1e-1152.56Show/hide
Query:  GETRAPLPPKQTENPQHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNNYHQ
        GET APLP KQ  N Q  AA E+D+ED ++K+I +   KP+MDG ++VFQ Q +LQ+   +HEKQI DLE K++N +Q
Subjt:  GETRAPLPPKQTENPQHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNNYHQ

TYK23271.1 hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa]3.0e-0639.56Show/hide
Query:  ENQTTLVEAGETRAPLPPKQTENP-------QHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN
        E +TT   A +T  P  PKQT+ P       +  A ++ DD+D F+K+I++ V KP+  G ++VFQ Q+NLQ++  +H+KQ   LE K++N
Subjt:  ENQTTLVEAGETRAPLPPKQTENP-------QHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]7.9e-0742.7Show/hide
Query:  DEDFYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN---YHQLQKDQLASEVASLKKQNKAMVSLIKKASSWSDR
        D++++K+I     KPM DG E++FQ QANLQ+   + +KQ+ +LE +++N    HQ Q D +  ++ SLK QN+A+ +LIK+ASS ++R
Subjt:  DEDFYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN---YHQLQKDQLASEVASLKKQNKAMVSLIKKASSWSDR

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]8.7e-0636.75Show/hide
Query:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +ESE+ T     L+ ++      D+P     Q    +A +TR P PPKQ+  P      Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QDLATKHEKQIVDLETK
        Q+   +++K + DLE K
Subjt:  QDLATKHEKQIVDLETK

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein4.2e-0636.75Show/hide
Query:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +ESE+ T     L+ ++      D+P     Q    +A +TR P PPKQ+  P      Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QDLATKHEKQIVDLETK
        Q+   +++K + DLE K
Subjt:  QDLATKHEKQIVDLETK

A0A5A7U0L9 Uncharacterized protein1.5e-1152.56Show/hide
Query:  GETRAPLPPKQTENPQHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNNYHQ
        GET APLP KQ  N Q  AA E+D+ED ++K+I +   KP+MDG ++VFQ Q +LQ+   +HEKQI DLE K++N +Q
Subjt:  GETRAPLPPKQTENPQHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNNYHQ

A0A5D3DHY1 Uncharacterized protein1.5e-0639.56Show/hide
Query:  ENQTTLVEAGETRAPLPPKQTENP-------QHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN
        E +TT   A +T  P  PKQT+ P       +  A ++ DD+D F+K+I++ V KP+  G ++VFQ Q+NLQ++  +H+KQ   LE K++N
Subjt:  ENQTTLVEAGETRAPLPPKQTENP-------QHYAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN

A0A5D3DS12 Uncharacterized protein3.8e-0742.7Show/hide
Query:  DEDFYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN---YHQLQKDQLASEVASLKKQNKAMVSLIKKASSWSDR
        D++++K+I     KPM DG E++FQ QANLQ+   + +KQ+ +LE +++N    HQ Q D +  ++ SLK QN+A+ +LIK+ASS ++R
Subjt:  DEDFYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDLETKLNN---YHQLQKDQLASEVASLKKQNKAMVSLIKKASSWSDR

A0A5D3E1H0 Uncharacterized protein4.2e-0636.75Show/hide
Query:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +ESE+ T     L+ ++      D+P     Q    +A +TR P PPKQ+  P      Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RESEDAT-----LAPESQTTVFFDEP---ENQTTLVEAGETRAPLPPKQTENP------QHYAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QDLATKHEKQIVDLETK
        Q+   +++K + DLE K
Subjt:  QDLATKHEKQIVDLETK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCGATACCGAATTTGAAGATTTCAGAGAGTCAGAGGATGCGACGTTGGCACCTGAGTCGCAAACCACAGTCTTTTTTGATGAGCCGGAAAATCAAAC
AACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTTGCCGCCTAAGCAAACTGAAAATCCACAACACTATGCAGCAGAAGAGAATGACGATGAAGATTTCTACAAGTACA
TCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGAAGTGTTCCAAACCCAAGCCAATCTGCAAGACCTTGCGACGAAACATGAGAAGCAGATTGTGGACTTG
GAAACAAAATTGAACAACTACCATCAATTGCAGAAAGACCAGCTCGCATCTGAAGTAGCGAGCCTGAAGAAACAAAATAAGGCGATGGTGAGTTTGATAAAAAAGGCTTC
CTCGTGGTCTGACAGGCAATACAAATCTTTAATGAACTACATCCACGCGGCCATCACAAGCCTCGTGCCTAAGCCTGCCATTCCGCCTAAATTCGAAAACCCCCTTTCTA
ATGATGAAGTGGACGCCGCAGCAGGACCTTCTGACGCGGCTATAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCGATACCGAATTTGAAGATTTCAGAGAGTCAGAGGATGCGACGTTGGCACCTGAGTCGCAAACCACAGTCTTTTTTGATGAGCCGGAAAATCAAAC
AACCCTTGTGGAAGCTGGTGAGACGCGGGCTCCTTTGCCGCCTAAGCAAACTGAAAATCCACAACACTATGCAGCAGAAGAGAATGACGATGAAGATTTCTACAAGTACA
TCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGAAGTGTTCCAAACCCAAGCCAATCTGCAAGACCTTGCGACGAAACATGAGAAGCAGATTGTGGACTTG
GAAACAAAATTGAACAACTACCATCAATTGCAGAAAGACCAGCTCGCATCTGAAGTAGCGAGCCTGAAGAAACAAAATAAGGCGATGGTGAGTTTGATAAAAAAGGCTTC
CTCGTGGTCTGACAGGCAATACAAATCTTTAATGAACTACATCCACGCGGCCATCACAAGCCTCGTGCCTAAGCCTGCCATTCCGCCTAAATTCGAAAACCCCCTTTCTA
ATGATGAAGTGGACGCCGCAGCAGGACCTTCTGACGCGGCTATAAATTAA
Protein sequenceShow/hide protein sequence
MQDLCDTEFEDFRESEDATLAPESQTTVFFDEPENQTTLVEAGETRAPLPPKQTENPQHYAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQDLATKHEKQIVDL
ETKLNNYHQLQKDQLASEVASLKKQNKAMVSLIKKASSWSDRQYKSLMNYIHAAITSLVPKPAIPPKFENPLSNDEVDAAAGPSDAAIN