; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008245 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008245
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:19863185..19863833
RNA-Seq ExpressionPI0008245
SyntenyPI0008245
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]9.7e-5265.05Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SSVIPPPSQP+LPKNRGSNLGGK+IRLVEAMAP LE EVKEHK+ESDSSKSDRHW+RP KKAK S D   GRG SA+ +P+VP  +PL   L  L+E  
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPL
        SD+SLTGPH VDS  EEVGTS+TPV +P EQ LRP ALL+EI RGKM +  KD+++ S+     PKA L+KV S + PL   E PL
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPL

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]8.3e-5164.86Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVPTPLVHIL-LVEICSDD
        +SSVIPPPSQPKLPKNRG+NLGGK+IRLVEAMA  LE E+ EHK+E+DSSKSDRHW+RP KKAK S DD   RGSSA+G P       H+  LVE+ +D+
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVPTPLVHIL-LVEICSDD

Query:  SLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPL
        SLTGPHVVDST+E V TSKTPV++P EQ LRP  LL+EI R KM +  K I+  NPPSKG   P+  L+KV ST+ PLK  ESPL
Subjt:  SLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPL

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]6.3e-5164.17Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SS IPP SQP+LPKNRGSNLGGK+IRLVEAMAP LE EVKE K+ESDSSKSDRHW+RP KKAK S D   GRG SA+ +P+VP  +PL   L  L+E  
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE
        SD+SLTGPH VDS  EEVGTS+TPV +P EQ LRP ALL+EI RGKM +  KD++N S+     PKA L+KV S + PLK  E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]3.7e-5163.1Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SS IPPPSQP+LPKNRGSNLGGK+IRLVEAMAP LE EV EHK+ESDSSKSDRHW+RP KKAK S D+  GRG SA+ +P+VP  +PL   L  L+ + 
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE
        SD+SL GPH VDS  EEVGTSKTPV +P EQ LRP ALL+EI RGKM +  KD+++ S+     PK+ L+KV S + PLK +E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE

TYK16513.1 hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]1.6e-5465.61Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        MSS IPPPSQPKLPKNRGSNLGGK+IRLVE M P LE EVKEHK+ESDSSKSDRHW+RP KKAK SCD+  GRG SA+G+P+VP  +PL + L  L+E+ 
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPLE
        SD+ LTGPHVVDS  EEVGTSKTPV + A+Q LRP ALLK+I RGKM +  KD+++ +  SKG    KAPL+K   T+ PLK +E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPLE

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein4.7e-5265.05Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SSVIPPPSQP+LPKNRGSNLGGK+IRLVEAMAP LE EVKEHK+ESDSSKSDRHW+RP KKAK S D   GRG SA+ +P+VP  +PL   L  L+E  
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPL
        SD+SLTGPH VDS  EEVGTS+TPV +P EQ LRP ALL+EI RGKM +  KD+++ S+     PKA L+KV S + PL   E PL
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPL

A0A5A7TX42 Uncharacterized protein3.1e-5164.17Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SS IPP SQP+LPKNRGSNLGGK+IRLVEAMAP LE EVKE K+ESDSSKSDRHW+RP KKAK S D   GRG SA+ +P+VP  +PL   L  L+E  
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE
        SD+SLTGPH VDS  EEVGTS+TPV +P EQ LRP ALL+EI RGKM +  KD++N S+     PKA L+KV S + PLK  E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE

A0A5A7UVX0 PMD domain-containing protein1.8e-5163.1Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        +SS IPPPSQP+LPKNRGSNLGGK+IRLVEAMAP LE EV EHK+ESDSSKSDRHW+RP KKAK S D+  GRG SA+ +P+VP  +PL   L  L+ + 
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE
        SD+SL GPH VDS  EEVGTSKTPV +P EQ LRP ALL+EI RGKM +  KD+++ S+     PK+ L+KV S + PLK +E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKN-SNPPSKGPKAPLEKVKSTYVPLKIFESPLE

A0A5D3CXA5 Uncharacterized protein7.8e-5565.61Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC
        MSS IPPPSQPKLPKNRGSNLGGK+IRLVE M P LE EVKEHK+ESDSSKSDRHW+RP KKAK SCD+  GRG SA+G+P+VP  +PL + L  L+E+ 
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVP--TPLVHIL--LVEIC

Query:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPLE
        SD+ LTGPHVVDS  EEVGTSKTPV + A+Q LRP ALLK+I RGKM +  KD+++ +  SKG    KAPL+K   T+ PLK +E PL+
Subjt:  SDDSLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPLE

A0A5D3D2A0 PMD domain-containing protein4.0e-5164.86Show/hide
Query:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVPTPLVHIL-LVEICSDD
        +SSVIPPPSQPKLPKNRG+NLGGK+IRLVEAMA  LE E+ EHK+E+DSSKSDRHW+RP KKAK S DD   RGSSA+G P       H+  LVE+ +D+
Subjt:  MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVPTPLVHIL-LVEICSDD

Query:  SLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPL
        SLTGPHVVDST+E V TSKTPV++P EQ LRP  LL+EI R KM +  K I+  NPPSKG   P+  L+KV ST+ PLK  ESPL
Subjt:  SLTGPHVVDSTLEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKG---PKAPLEKVKSTYVPLKIFESPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTGTCATTCCTCCCCCATCACAACCCAAACTACCCAAGAATCGAGGAAGCAATCTGGGTGGCAAACAAATCCGCTTGGTTGAAGCAATGGCTCCTATCCTCGA
GAGAGAAGTCAAGGAGCACAAAGAGGAAAGTGATAGCAGCAAAAGCGATCGTCATTGGAGGAGACCTTCGAAGAAAGCAAAGGCATCATGTGATGATTCCTGTGGAAGAG
GTTCAAGTGCTATGGGAATTCCTAATGTTCCAACACCACTGGTTCACATATTACTTGTAGAGATATGTAGTGATGACTCTCTGACAGGGCCTCATGTCGTGGATTCAACC
CTTGAAGAAGTTGGTACCTCAAAGACACCAGTTGCTAGACCAGCTGAACAACCCTTACGTCCTCCTGCTCTTCTCAAGGAGATTCATCGAGGCAAGATGAAGATGAATGT
AAAAGACATTAAAAATTCAAATCCTCCATCCAAAGGCCCCAAAGCGCCTTTAGAGAAGGTCAAATCCACATATGTGCCTCTCAAGATTTTTGAGTCGCCTTTAGAACACT
TCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTGTCATTCCTCCCCCATCACAACCCAAACTACCCAAGAATCGAGGAAGCAATCTGGGTGGCAAACAAATCCGCTTGGTTGAAGCAATGGCTCCTATCCTCGA
GAGAGAAGTCAAGGAGCACAAAGAGGAAAGTGATAGCAGCAAAAGCGATCGTCATTGGAGGAGACCTTCGAAGAAAGCAAAGGCATCATGTGATGATTCCTGTGGAAGAG
GTTCAAGTGCTATGGGAATTCCTAATGTTCCAACACCACTGGTTCACATATTACTTGTAGAGATATGTAGTGATGACTCTCTGACAGGGCCTCATGTCGTGGATTCAACC
CTTGAAGAAGTTGGTACCTCAAAGACACCAGTTGCTAGACCAGCTGAACAACCCTTACGTCCTCCTGCTCTTCTCAAGGAGATTCATCGAGGCAAGATGAAGATGAATGT
AAAAGACATTAAAAATTCAAATCCTCCATCCAAAGGCCCCAAAGCGCCTTTAGAGAAGGTCAAATCCACATATGTGCCTCTCAAGATTTTTGAGTCGCCTTTAGAACACT
TCTAG
Protein sequenceShow/hide protein sequence
MSSVIPPPSQPKLPKNRGSNLGGKQIRLVEAMAPILEREVKEHKEESDSSKSDRHWRRPSKKAKASCDDSCGRGSSAMGIPNVPTPLVHILLVEICSDDSLTGPHVVDST
LEEVGTSKTPVARPAEQPLRPPALLKEIHRGKMKMNVKDIKNSNPPSKGPKAPLEKVKSTYVPLKIFESPLEHF