CuGenDBv2

Gene ID	PI0008280
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Trigger_N domain-containing protein
Genome location	chr11:854675..858018
RNA-Seq Expression	PI0008280
Synteny	PI0008280
Gene Ontology terms	GO:0000413 - protein peptidyl-prolyl isomerization (biological process) GO:0015031 - protein transport (biological process) GO:0043335 - protein unfolding (biological process) GO:0051083 - 'de novo' cotranslational protein folding (biological process) GO:0061077 - chaperone-mediated protein folding (biological process) GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005215 - Trigger factor IPR008881 - Trigger factor, ribosome-binding, bacterial IPR036611 - Trigger factor ribosome-binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460020.1 PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]

2.2e-109

90.43

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Query:  SATAIATVTNIA-SEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIV
        +ATA ATVTNIA SEF RPIFT+V VKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYS+H+IGSRFLSKPTSIASSGLEAA+TDYKGNAI LKNA++V
Subjt:  SATAIATVTNIA-SEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIV

Query:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS
        VES+EEN+IQLRVDLTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKD KVNTTQ+
Subjt:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS

Query:  ADELAVLFSPGKEFGFNAILEVESASDAEN
        ADEL VLF+PGKEFGFNAILE+ESASDAE+
Subjt:  ADELAVLFSPGKEFGFNAILEVESASDAEN

XP_011656737.1 uncharacterized protein LOC101212225 [Cucumis sativus]

2.6e-110

90.39

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Query:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV
        +ATA ATVTNIASEF RPIFT+VPVKGYCHNALVCLNFGGVEFDNV+DGLCRRSSFSYS HKIGSRFLSKPTSIASSGLEAAITDYKGN I LKNA++VV
Subjt:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV

Query:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA
        ES+EEN+IQLRVDLTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKF+IQEILNSTM DYAKKENINVKDKKV+TTQ+A
Subjt:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA

Query:  DELAVLFSPGKEFGFNAILEVESASDAEN
        DEL VLF+PGKEFGFNAILE+ESASDAE+
Subjt:  DELAVLFSPGKEFGFNAILEVESASDAEN

XP_022155406.1 uncharacterized protein LOC111022553 [Momordica charantia]

2.3e-98

81.94

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Query:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE
        A+A ATVTN+ASE+RR  F +VPVKGYC + L C N GGVEFDNVQ+GLCRRSSFS S HK+GSRFLS+PTSIASSGLEAAITDYKGNAI LKNA+IVVE
Subjt:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE

Query:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD
        S++EN IQLRVDL+GDETQK+FDQVLTNLA SAPPMPGFR QKGGKTSNVPK+FLLEVLG++RVTKFVIQEILNSTMADYAKKEN+NVKDKKVNTTQ+AD
Subjt:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD

Query:  ELAVLFSPGKEFGFNAILEVESASDAE
        EL +LF+PGKEFGFNAILE+ESA+  +
Subjt:  ELAVLFSPGKEFGFNAILEVESASDAE

XP_023004174.1 uncharacterized protein LOC111497577 [Cucurbita maxima]

4.0e-95

80.85

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Query:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV
        +ATA ATV NIASEFRRP+FT+VPV G   NAL+C+NFGGVEF+NVQD LC RSS SYS   +GSRFLS+PT+IASSGLEAAITDYKG AI LKNA+IVV
Subjt:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV

Query:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA
        ES++EN+IQLRV+LTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKFVIQEILNSTMADYAKKENI VKDK VNTTQ+ 
Subjt:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA

Query:  DELAVLFSPGKEFGFNAILEVE------SASDAEN
        DEL VLF PGKEFGFNAILE+E      SAS+ EN
Subjt:  DELAVLFSPGKEFGFNAILEVE------SASDAEN

XP_038906537.1 uncharacterized protein LOC120092511 [Benincasa hispida]

8.1e-112

90.91

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Query:  MMSATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARI
        M+SATA AT TNIASEFR PIFT+VPVKGYC N LVCLNFGGVEFDNVQDGLCRRSSFSYS+HK+GSRFLSKPTSIASSGLEAAITDYKGNAI LKNA++
Subjt:  MMSATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARI

Query:  VVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQ
        VVES+EEN+IQLRVDLTGDETQKVFDQVLTNLA SAPPMPGFR+QKGGKTSNVPK+FLLEVLGKDRV KFVIQEILNSTMADYAKKENINVKDKKVNTTQ
Subjt:  VVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQ

Query:  SADELAVLFSPGKEFGFNAILEVESASDAEN
        +ADEL VLFSPGKEFGFNAILE+ESASDAEN
Subjt:  SADELAVLFSPGKEFGFNAILEVESASDAEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K988 Trigger_N domain-containing protein

1.3e-110

90.39

Show/hide

Query:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV
        +ATA ATVTNIASEF RPIFT+VPVKGYCHNALVCLNFGGVEFDNV+DGLCRRSSFSYS HKIGSRFLSKPTSIASSGLEAAITDYKGN I LKNA++VV
Subjt:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV

Query:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA
        ES+EEN+IQLRVDLTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKF+IQEILNSTM DYAKKENINVKDKKV+TTQ+A
Subjt:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA

Query:  DELAVLFSPGKEFGFNAILEVESASDAEN
        DEL VLF+PGKEFGFNAILE+ESASDAE+
Subjt:  DELAVLFSPGKEFGFNAILEVESASDAEN

A0A1S3CBN2 uncharacterized protein LOC103498959

1.1e-109

90.43

Show/hide

Query:  SATAIATVTNIA-SEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIV
        +ATA ATVTNIA SEF RPIFT+V VKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYS+H+IGSRFLSKPTSIASSGLEAA+TDYKGNAI LKNA++V
Subjt:  SATAIATVTNIA-SEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIV

Query:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS
        VES+EEN+IQLRVDLTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKD KVNTTQ+
Subjt:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS

Query:  ADELAVLFSPGKEFGFNAILEVESASDAEN
        ADEL VLF+PGKEFGFNAILE+ESASDAE+
Subjt:  ADELAVLFSPGKEFGFNAILEVESASDAEN

A0A6J1DRL2 uncharacterized protein LOC111022553

1.1e-98

81.94

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Query:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE
        A+A ATVTN+ASE+RR  F +VPVKGYC + L C N GGVEFDNVQ+GLCRRSSFS S HK+GSRFLS+PTSIASSGLEAAITDYKGNAI LKNA+IVVE
Subjt:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE

Query:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD
        S++EN IQLRVDL+GDETQK+FDQVLTNLA SAPPMPGFR QKGGKTSNVPK+FLLEVLG++RVTKFVIQEILNSTMADYAKKEN+NVKDKKVNTTQ+AD
Subjt:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD

Query:  ELAVLFSPGKEFGFNAILEVESASDAE
        EL +LF+PGKEFGFNAILE+ESA+  +
Subjt:  ELAVLFSPGKEFGFNAILEVESASDAE

A0A6J1H8V8 uncharacterized protein LOC111461115

1.1e-93

80.08

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Query:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE
        A+A ATV NIASEFRRP+FT+VPV G   NALVCLNFGGVEF+NVQD LC RSS SYS   +GSRFLS+PT+IASSGLEAAITDYKG AI LKNA+IVVE
Subjt:  ATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVE

Query:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD
        S++EN+IQLRVDLTGDETQKVFDQVLTNLA SAP MPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKFVIQEILNSTM DYAKKENI VKDK VNTTQ+ D
Subjt:  SKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSAD

Query:  ELAVLFSPGKEFGFNAIL--------EVESASDAEN
        EL  LF PGKEFGFNAIL        E+ESAS+ EN
Subjt:  ELAVLFSPGKEFGFNAIL--------EVESASDAEN

A0A6J1KVH6 uncharacterized protein LOC111497577

1.9e-95

80.85

Show/hide

Query:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV
        +ATA ATV NIASEFRRP+FT+VPV G   NAL+C+NFGGVEF+NVQD LC RSS SYS   +GSRFLS+PT+IASSGLEAAITDYKG AI LKNA+IVV
Subjt:  SATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVV

Query:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA
        ES++EN+IQLRV+LTGDETQKVFDQVLTNLA SAPPMPGFRKQKGGKTSNVPK+FLLEVLGKDRVTKFVIQEILNSTMADYAKKENI VKDK VNTTQ+ 
Subjt:  ESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSA

Query:  DELAVLFSPGKEFGFNAILEVE------SASDAEN
        DEL VLF PGKEFGFNAILE+E      SAS+ EN
Subjt:  DELAVLFSPGKEFGFNAILEVE------SASDAEN

SwissProt top hits

e value

%identity

Alignment

B1XL18 Trigger factor

4.3e-07

27.2

Show/hide

Query:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        +++ E    +++ L +++  D TQK +D  +  LA +   +PGFRK K      VPK  L++ LG +R+   V++++++ ++     +ENI         
Subjt:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQSADELAVLFSPGKEFGFNAILEV
          S D+L   + PG+   F A ++V
Subjt:  TQSADELAVLFSPGKEFGFNAILEV

B2IT89 Trigger factor

1.8e-05

27.78

Show/hide

Query:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        ++  E    ++I L +++T + T++ ++QV+ NLA +A  +PGFR+ K      VP+  LL+ LG  R+    ++E++   +    K+E I    +    
Subjt:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQSADELAVLFSPGKEFGFNAILEVE
          S ++L   + PGK     A ++VE
Subjt:  TQSADELAVLFSPGKEFGFNAILEVE

Q3M725 Trigger factor

2.5e-07

30.16

Show/hide

Query:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        ++  E    ++I L +++T + TQK ++QV+ NL+ +   +PGFRK K      VP+  LL+ LGK  +    ++E+L   +    K+E+I    +    
Subjt:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQSADELAVLFSPGKEFGFNAILEVE
          S D+L   + PG+   F A ++VE
Subjt:  TQSADELAVLFSPGKEFGFNAILEVE

Q8YQX9 Trigger factor

2.5e-07

30.16

Show/hide

Query:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT
        ++  E    ++I L +++T + TQK ++QV+ NL+ +   +PGFRK K      VP+  LL+ LGK  +    ++E+L   +    K+E+I    +    
Subjt:  RIVVESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNT

Query:  TQSADELAVLFSPGKEFGFNAILEVE
          S D+L   + PG+   F A ++VE
Subjt:  TQSADELAVLFSPGKEFGFNAILEVE

Arabidopsis top hits

e value

%identity

Alignment

AT2G30695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).

6.1e-25

42.06

Show/hide

Query:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS
        VE++  NE+++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+LG  +V K VI++++NS + DY K+E++ V  K++   QS
Subjt:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS

Query:  ADELAVLFSPGKEFGFNAILEVESAS
         ++L   F PG+ F F+A ++++ AS
Subjt:  ADELAVLFSPGKEFGFNAILEVESAS

AT2G30695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

6.1e-25

42.06

Show/hide

Query:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS
        VE++  NE+++ V ++G++TQ VF+ V   +  +A P+PGFR+ KGGKT N+PK  LLE+LG  +V K VI++++NS + DY K+E++ V  K++   QS
Subjt:  VESKEENEIQLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQS

Query:  ADELAVLFSPGKEFGFNAILEVESAS
         ++L   F PG+ F F+A ++++ AS
Subjt:  ADELAVLFSPGKEFGFNAILEVESAS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGTCCGCCACCGCAATCGCAACGGTAACCAACATCGCCTCAGAATTCCGGCGGCCAATATTCACCGAAGTTCCTGTTAAAGGCTATTGCCACAATGCTCTGGTTTG
TTTGAACTTTGGTGGCGTTGAATTTGATAATGTACAGGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGTGCCCATAAAATTGGTTCCAGATTCTTGTCCAAACCGA
CGTCCATAGCTAGTTCAGGTTTGGAGGCAGCTATCACGGATTACAAAGGCAATGCAATAAAGTTGAAAAATGCTAGAATAGTTGTAGAATCTAAAGAGGAAAACGAGATA
CAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCGGCTCAGCACCGCCCATGCCAGGATTTCGTAAGCAAAAAGG
AGGGAAAACATCAAATGTCCCAAAAGCCTTCCTCTTGGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATG
CAAAGAAGGAAAATATAAATGTGAAGGACAAGAAGGTTAATACAACTCAATCAGCAGATGAACTGGCAGTGTTGTTTAGTCCAGGAAAAGAATTTGGTTTCAATGCCATA
CTTGAAGTTGAATCTGCTTCAGATGCTGAAAATTGA

mRNA sequence

Show/hide mRNA sequence

CGGCGTCGTATTACAACTCGGATAAGTCTCTATTCTGTGAGAACCGAAGAAAGACAGCTGAGCCGCGCTTGGAAAAATGATGTCCGCCACCGCAATCGCAACGGTAACCA
ACATCGCCTCAGAATTCCGGCGGCCAATATTCACCGAAGTTCCTGTTAAAGGCTATTGCCACAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTA
CAGGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGTGCCCATAAAATTGGTTCCAGATTCTTGTCCAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCTAT
CACGGATTACAAAGGCAATGCAATAAAGTTGAAAAATGCTAGAATAGTTGTAGAATCTAAAGAGGAAAACGAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACAC
AAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCGGCTCAGCACCGCCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAGCCTTCCTC
TTGGAAGTCCTTGGTAAGGACCGAGTCACGAAGTTTGTCATACAAGAAATATTGAACTCAACTATGGCAGATTATGCAAAGAAGGAAAATATAAATGTGAAGGACAAGAA
GGTTAATACAACTCAATCAGCAGATGAACTGGCAGTGTTGTTTAGTCCAGGAAAAGAATTTGGTTTCAATGCCATACTTGAAGTTGAATCTGCTTCAGATGCTGAAAATT
GAGTTCAAACATGTCCCATTTTTCAAGTGAAGATTTTGTCCACTTATTCTTCAATGGGCCTCCTTTTGTCAAAGGCTTATGCATAGTTGAATACAACTCTAGTTGTTTGT
TTCTTTGTACATGTGGAATGAATAGTTTGGAGTTCTGATTAATTTATGTTTGATGCACTTCATTAGTTTCA

Protein sequence

Show/hide protein sequence

MMSATAIATVTNIASEFRRPIFTEVPVKGYCHNALVCLNFGGVEFDNVQDGLCRRSSFSYSAHKIGSRFLSKPTSIASSGLEAAITDYKGNAIKLKNARIVVESKEENEI
QLRVDLTGDETQKVFDQVLTNLAGSAPPMPGFRKQKGGKTSNVPKAFLLEVLGKDRVTKFVIQEILNSTMADYAKKENINVKDKKVNTTQSADELAVLFSPGKEFGFNAI
LEVESASDAEN

PI0008280 (gene) of Melon (PI 482460) v1 genome