; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0008288 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008288
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationchr04:2175331..2185147
RNA-Seq ExpressionPI0008288
SyntenyPI0008288
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]9.8e-25096.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLL+HGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER V+PADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]1.9e-25398.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLL+HGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]1.5e-25096.89Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLL+HGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]9.8e-25096.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLL+HGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER V+PADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]6.8e-25197.33Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLL+HGEVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTL+DEQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWED KN+RLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 29.2e-25498.67Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLL+HGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+SKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 21.5e-24093.89Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLL+HGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 23.9e-24488.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLL++GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD
        TNAQLWYIIREYISN+EERGV+PADLISFLLELSFHVTGE                                        AYDIDTL++EQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGE----------------------------------------AYDIDTLSDEQRYAIKDLAD

Query:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
        LGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL
Subjt:  LGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQ
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 22.6e-24896.22Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLL+ GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEER V+PADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 27.3e-25196.89Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLL+HGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISNAEERGV+PADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
        YDEFPSREVFEAACDYAREWNGLLWEDSK LRLVVKADIHTHMREHLRRQ
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 46.1e-6934.08Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  A+ RG++  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQ
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

P60027 General transcription factor IIH subunit 42.7e-6933.85Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG++  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQ
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

Q680U9 General transcription and DNA repair factor IIH subunit TFB22.1e-20777.61Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK ++ G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER V+PADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q+
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN

Q6CLR2 General transcription and DNA repair factor IIH subunit TFB29.1e-6530.86Show/hide
Query:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANLQK
        D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  VS + +++WV PD   + + +I  +  L + IE  + K+    RLNP F+ + + 
Subjt:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANLQK

Query:  LLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE
        +L  GE+       ++      S   L+ Y+ ++WE  L  ++ +     P      V+ + Q  GL+ + +    ++T  GFQFLL + NAQ+W ++ +
Subjt:  LLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE

Query:  YISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA--------------
        Y+  AE   ++P D+++F+  L     G+AY  D LS+ QR  ++D+ D GL+  Q     + F PT+LAT L        S S+A              
Subjt:  YISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL--------SMSLA--------------

Query:  -------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------
               +++ R Q G +++ETNF++Y+YS+S L   IL LF  ++ +  N++ G +T+ES+ NA  NGITAEQI+ +L+ +AHPR              
Subjt:  -------DSSSRKQ-GFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPR--------------

Query:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR
            V E +  +P  V DQIRLW+ +L+R+     + Y +F S + ++   DYA++   LLW++ K     V  + ++ + +  RR
Subjt:  ----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRR

Q92759 General transcription factor IIH subunit 42.7e-6933.85Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  A+ RG++  +++SFL +LSF   G+ Y ++ +SD     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S+L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQ
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQ

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related1.5e-20877.61Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK ++ G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER V+PADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q+
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN

AT4G17020.2 transcription factor-related5.2e-20976.19Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK ++ G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER V+PADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQNLFPGIHGKSWC
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q+        +WC
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQNLFPGIHGKSWC

AT4G17020.3 transcription factor-related1.5e-20877.61Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VAIDRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK ++ G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI NAEER V+PADLISFLLELSFHVTG+AY+++TL++ Q   +KDLADLGLVKLQQGRK+SWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNAEERGVNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+SKL CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN
        YDEFPS++VFEAACD+AREW GLLWEDSK +RLVVK+++H  MRE L  Q+
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCTAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTATTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACATTCCAAGCAAACCTC
CAAAAGCTTTTAGTACATGGTGAAGTTCTAGCCAGAGAACCGATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACGCTGAGGAGCGAGGT
GTGAATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAAAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCGATGAGTTTGGCAGATTCCTCTTCAA
GGAAACAGGGGTTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACAAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAACAGATAGTTACTTTTCTACAACAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGAGAACATCTTCGGCGTCAAAACTTGTTTCCAGGAATCCATGGGAAATCATGGTGCTCATTGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCGCCACTGGCTAAGAAGTTTGTTTTACAAATGTTATACATTGATGCTCCAGTTTCAGCTAAGTCCATGGAGGAGTGGGTGCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTATTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCAGATAGGAAAAGAGAAACAACCTACCGGCTAAATCCAACATTCCAAGCAAACCTC
CAAAAGCTTTTAGTACATGGTGAAGTTCTAGCCAGAGAACCGATGCCTTCTAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTGGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACGCTGAGGAGCGAGGT
GTGAATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATTGATACACTGTCAGATGAACAGAGGTATGCTATCAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAAGAAAGTTGGTTCATACCTACTAAATTAGCCACAAATCTTTCGATGAGTTTGGCAGATTCCTCTTCAA
GGAAACAGGGGTTTGTTGTTGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAAACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACAAAAGAAAGCTTGTATAATGCTTTTAAGAATGGGATTACAGCAGAACAGATAGTTACTTTTCTACAACAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACAGATCAGATTAGGTTATGGGAATCAGATCTTAATAGGGTTGATATTACTCCCGCACATTTTTACGACGAAT
TTCCTTCCAGGGAAGTTTTCGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGAGGATTCAAAAAACTTGCGACTGGTAGTGAAGGCAGACATACAC
ACACATATGCGAGAACATCTTCGGCGTCAAAACTTGTTTCCAGGAATCCATGGGAAATCATGGTGCTCATTGTGGTAA
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAIDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLVHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERG
VNPADLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSKLHCEILRLFSRIEYQL
PNLIVGAITKESLYNAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIH
THMREHLRRQNLFPGIHGKSWCSLW