CuGenDBv2

Gene ID	PI0008296
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Genome location	chr06:10840372..10841281
RNA-Seq Expression	PI0008296
Synteny	PI0008296
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant IPR018289 - MULE transposase domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

2.1e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

2.1e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]

2.1e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]

4.4e-75

56.34

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Query:  LLNEGCSSSVSNDEVIREISYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        LL  G SS  SND+VI+ + + GDLKEK++F SKE+L KCF +I V  NFQFRTT SN +  E +CLQEGC+WYVRAS YKKSELWMLRKYISDH     
Subjt:  LLNEGCSSSVSNDEVIREISYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF-----------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHF
                            DF                       NISYQKAWRVKEHI++ L GD  +SYSLI  FF +L E NPGT T L++D++GHF
Subjt:  --------------------DF-----------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHF

Query:  KFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        K CFM   ASIEGW+Y  P IS+DGTFLK KFG  LL+AS+ DGN+ IFPLAFAIVDSEND SW WFF
Subjt:  KFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]

1.4e-68

53.73

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Query:  EVIREISYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDHD-----------------
        +VI +I    DLKEK++F SKE+LSKCF  I VK NF+F+T  SN R +EFRC+Q+GC+WYVRASRYK S+LWMLRK+I  HD                 
Subjt:  EVIREISYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDHD-----------------

Query:  -------------------------------FNISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKFCFMAFSASIEG
                                        NISY KAWR KEHI+K LKGD  ESY+LI  F  KL E NPGT T  E D  GHFK+C+MA  +SIEG
Subjt:  -------------------------------FNISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKFCFMAFSASIEG

Query:  WKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        WK+CRP I +DGTFLKCK+   LLTAS+ DGN++ FPLAF+IVDSENDASW WFF
Subjt:  WKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like

1.0e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like

2.2e-64

50.75

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F +KE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

A0A5A7V6N4 SWIM-type domain-containing protein

6.5e-64

47.46

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Query:  LNEGCSSSVSNDEVIREISYYGDL-----------KEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRK
        +   CSSS+   ++  E+  + D+           KEK+LF SKE+L K F  I VK+NF+F+T  SN R +E RC ++GC W+VRASRYK+SE WM+RK
Subjt:  LNEGCSSSVSNDEVIREISYYGDL-----------KEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRK

Query:  YISD----------------------------------------------HDFNISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTL
        Y+SD                                              +  ++SY KAWR KE ++K LKGD  +SY+LI  FF KL E NPG+ T  
Subjt:  YISD----------------------------------------------HDFNISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTL

Query:  EMDDSGHFKFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        E+D +GHFK+CFMA ++SIEGW+YCRP I++DGTFLKCK+G  LLTA++ DGNS+IFPLAF+IVDSENDASW WFF
Subjt:  EMDDSGHFKFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like

1.0e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

A0A5D3DJR8 MuDR family transposase

1.0e-64

51.13

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Query:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----
        SSS+ +D +++ +I     S   DLKEK++F SKE+LSK F  I +KNNF+F+T  SN + +EF+C Q+ C WYVRASRYK  ELW LRKYI++H     
Subjt:  SSSVSND-EVIREI-----SYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH-----

Query:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF
                            DF                     N+SY KAWR KE ++  L G+  ESY+LI +FF KL E NPG+ T  E D  GHFK+
Subjt:  --------------------DF---------------------NISYQKAWRVKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKF

Query:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF
        CFMA  A IEGWKYCRP IS+DGTFLK K+G  LLTAS+ DGN+QIFPLAF+IVDSENDASW WFF
Subjt:  CFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWFF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

3.3e-12

33.57

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Query:  WMLRKYISDHDFNISYQKAWRVKEHIVKLLK---GDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGH------FKFCFMAFSASIEGWKYCRPIISLD
        W  +K+    D  + +     V++  VK +K   GD  +S+ LI      L  SN G     + D   H      F+  F AFS SI+G+++CRP+I +D
Subjt:  WMLRKYISDHDFNISYQKAWRVKEHIVKLLK---GDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGH------FKFCFMAFSASIEGWKYCRPIISLD

Query:  GTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWF
           L  K+   L+ AS+ D  +Q FPLAFA+    +  SW WF
Subjt:  GTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWF

AT1G64255.1 MuDR family transposase

3.0e-13

26.53

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Query:  DLKEKNLFESKEVLSKC--FCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH--------DFNISYQ-----------
        DL+    F+  + L K   +C +  +     R T  +     F C++  CKW + A+R KK  L  + KY   H        DF   ++           
Subjt:  DLKEKNLFESKEVLSKC--FCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDH--------DFNISYQ-----------

Query:  ---------KAWR--------------VKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMD---DSGHFKFC--FMAFSASIEGWKYCRPIIS
                 K W+               KE  +K + GD  +S+         L  SN G     + D   +     FC  F AF  SIEG+++CRP+I 
Subjt:  ---------KAWR--------------VKEHIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMD---DSGHFKFC--FMAFSASIEGWKYCRPIIS

Query:  LDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWF
        +D   L C++   L+ AS  D  ++ FPLAFA+    +   W WF
Subjt:  LDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWF

AT1G64260.1 MuDR family transposase

1.6e-14

27.45

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Query:  FRCLQEGCKWYVRASRYKKSELWMLRKYISDH--------DFNISY--------------------QKAWRVKE--------------HIVKLLKGDVVE
        F C++  CKW +RA+R ++  L  + KY   H        DF   +                    +K W+ K                ++K + GD  +
Subjt:  FRCLQEGCKWYVRASRYKKSELWMLRKYISDH--------DFNISY--------------------QKAWRVKE--------------HIVKLLKGDVVE

Query:  SYSLISSFFDKLVESNPGTCTTLEMD-----DSGHFKFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASW
        S+ ++         SN G     + D     D   F+  F +FS SIEG+++CRP+I +D   L  K+   L+ AS  D  ++ FPLAFA+    +  SW
Subjt:  SYSLISSFFDKLVESNPGTCTTLEMD-----DSGHFKFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASW

Query:  TWFF
         WFF
Subjt:  TWFF

Sequences

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CDS sequence

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ATGTTGCTAAATGAAGGTTGTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGAGATTTCTTATTATGGTGATTTGAAGGAAAAAAATTTATTTGAAAGTAAAGAAGT
TCTTTCAAAGTGTTTTTGCATAATAGTAGTGAAGAATAACTTTCAATTTAGAACTACAGTATCAAATTTTAGGTTTCTTGAATTCAGATGTTTGCAAGAAGGGTGCAAAT
GGTATGTTAGGGCATCCCGTTATAAGAAGAGTGAGTTGTGGATGCTACGAAAATACATTTCTGACCATGACTTCAATATAAGTTATCAAAAAGCTTGGAGGGTAAAAGAA
CACATAGTAAAGTTATTAAAAGGTGATGTAGTTGAATCATACTCGTTGATTTCAAGCTTCTTTGATAAATTGGTCGAATCTAACCCAGGTACATGCACTACTTTAGAGAT
GGATGATAGTGGTCATTTCAAGTTTTGCTTTATGGCTTTTAGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATCATTTCTCTTGATGGTACGTTTTTGAAGTGTA
AGTTTGGTGACATCCTATTAACAGCCTCATCACAAGATGGTAACAGTCAAATCTTTCCTCTTGCTTTTGCTATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTT
TTTTAG

mRNA sequence

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Protein sequence

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MLLNEGCSSSVSNDEVIREISYYGDLKEKNLFESKEVLSKCFCIIVVKNNFQFRTTVSNFRFLEFRCLQEGCKWYVRASRYKKSELWMLRKYISDHDFNISYQKAWRVKE
HIVKLLKGDVVESYSLISSFFDKLVESNPGTCTTLEMDDSGHFKFCFMAFSASIEGWKYCRPIISLDGTFLKCKFGDILLTASSQDGNSQIFPLAFAIVDSENDASWTWF
F

PI0008296 (gene) of Melon (PI 482460) v1 genome