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PI0008302 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008302
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:17559908..17560725
RNA-Seq ExpressionPI0008302
SyntenyPI0008302
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.4e-6973.6Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.0e-6872.08Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNS+AG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRG+H EYLYYE PAAVPE               Q DEQQQ++N E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.1e-6973.6Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICNNNE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT+S    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPEQPDE---------------QQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPEQ DE               QQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPEQPDE---------------QQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.2e-6873.1Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DS V QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.6e-6872.86Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAG
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAG

Query:  PSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
         SS++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  PSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein6.9e-7073.6Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein5.3e-7073.6Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICNNNE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QT+S    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPEQPDE---------------QQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPEQ DE               QQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPEQPDE---------------QQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.9e-6973.1Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DS V QSSDFG GYYNSEAG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.9e-6872.08Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+ QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNS+AG S
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAGPS

Query:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
        S++FGQ YYDLG+DPSSSYMHGHGRGRG+H EYLYYE PAAVPE               Q DEQQQ++N E ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  SSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-6872.86Show/hide
Query:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAG
        VL+ICN+NE+YMENIHYMY+VPIVPAPVQRRR  VQEPD+LEEV+QH +EVPP+   QTQS    VSP+MMMPTF T Y DSGV QSSDFG GYYNSEAG
Subjt:  VLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPV--RQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEAG

Query:  PSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH
         SS++FGQ YYDLG+DPSSSYMHGHGRGRGEH EYLYYE PAAVPE               Q DEQQQ++NQE ++QQRVQ RRRQPARNRR PGCGTH
Subjt:  PSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPE---------------QPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAATCGCAGAAGATTTATTGCTACGGGACCTTCGTCCTAGATATATGCAACAATAACGAGCGATACATGGAGAACATACACTATATGTACAATGTACCTATTGT
ACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAGAAGTGCCTCCTGTAAGACAAACACAAAGCGGGA
CTGGTGACGTTAGTCCAATGATGATGATGCCGACATTTGAAACGGGATATTGTGATTCAGGAGTCAGTCAATCGTCAGACTTCGGGACAGGATATTACAATTCAGAGGCA
GGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCGTGGAGAACATTACGAATATTT
GTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAAAAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCAGGGTCGACGACGGCAACCAG
CTAGAAATCGGCGATGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAATCGCAGAAGATTTATTGCTACGGGACCTTCGTCCTAGATATATGCAACAATAACGAGCGATACATGGAGAACATACACTATATGTACAATGTACCTATTGT
ACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAGAAGTGCCTCCTGTAAGACAAACACAAAGCGGGA
CTGGTGACGTTAGTCCAATGATGATGATGCCGACATTTGAAACGGGATATTGTGATTCAGGAGTCAGTCAATCGTCAGACTTCGGGACAGGATATTACAATTCAGAGGCA
GGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCATCTTCATACATGCATGGACATGGGCGTGGTCGTGGAGAACATTACGAATATTT
GTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAAAAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCAGGGTCGACGACGGCAACCAG
CTAGAAATCGGCGATGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MAKSQKIYCYGTFVLDICNNNERYMENIHYMYNVPIVPAPVQRRRARVQEPDELEEVEQHVQEVPPVRQTQSGTGDVSPMMMMPTFETGYCDSGVSQSSDFGTGYYNSEA
GPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHYEYLYYEPPAAVPEQPDEQQQEKNQEGLEQQRVQGRRRQPARNRRCPGCGTH