CuGenDBv2

Gene ID	PI0008327
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial
Genome location	chr04:31950752..31955709
RNA-Seq Expression	PI0008327
Synteny	PI0008327
Gene Ontology terms	GO:0006450 - regulation of translational fidelity (biological process) GO:0032543 - mitochondrial translation (biological process) GO:0070681 - glutaminyl-tRNAGln biosynthesis via transamidation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009507 - chloroplast (cellular component) GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016740 - transferase activity (molecular function) GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (molecular function)
InterPro domains	IPR003837 - Glu-tRNAGln amidotransferase C subunit IPR036113 - Glu-tRNAGln amidotransferase superfamily, subunit C

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136231.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis sativus]

2.3e-67

94.56

Show/hide

Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASSFPSLK QIFIS  TAFHSLPVSNI+IRNSSTASGI ASLQPPDVPRLAQTARISLTPTQ EEFAPKITQVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGG+QRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

XP_008466091.1 PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis melo]

3.5e-68

94.56

Show/hide

Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASSFPSLK QIFIS  TAFHSLPVSNITIR SSTASG+ ASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQRND+PETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

XP_022143239.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Momordica charantia]

9.5e-58

82.31

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GA S PSL+ QIFI     FH+LP+S+  IR  ST   I ASLQPPDVPRLA+TARISLTPT+VEEFAPKI QVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQRNDI ETFENREAMIGAVPVFDEPYI+VPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

XP_023521629.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]

1.5e-55

81.63

Show/hide

Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        M S AL LL+GASS PSL  QIFIS  T+ +SLPVSNI IR  STA GI ASLQPPDVPRLA+TARISL P++VEEFAPKI QVVDWFGQLQ VDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQR+D+ ETFENREAMIGAVPVFDEPYI+VPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

XP_038897282.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Benincasa hispida]

1.2e-60

87.76

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASS PSLK +IFIS  T  HSLP S I IR  STAS I ASLQPPDVPRLA+TARISLTPTQVEEFAPKI QVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        P+IRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJU5 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.1e-67

94.56

Show/hide

Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASSFPSLK QIFIS  TAFHSLPVSNI+IRNSSTASGI ASLQPPDVPRLAQTARISLTPTQ EEFAPKITQVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGG+QRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

A0A1S3CQE8 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.7e-68

94.56

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASSFPSLK QIFIS  TAFHSLPVSNITIR SSTASG+ ASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQRND+PETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

A0A5A7T6R5 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.7e-68

94.56

Show/hide

Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GASSFPSLK QIFIS  TAFHSLPVSNITIR SSTASG+ ASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQRND+PETFENREAMIGAVPVFDEPYIKVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

A0A6J1CQ90 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

4.6e-58

82.31

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGSKALPLL+GA S PSL+ QIFI     FH+LP+S+  IR  ST   I ASLQPPDVPRLA+TARISLTPT+VEEFAPKI QVVDWFGQLQTVDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQRNDI ETFENREAMIGAVPVFDEPYI+VPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

A0A6J1FM33 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

7.3e-56

81.63

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGS AL LL+GASS PSL  QIFIS  T+ +SLPVS+I IR  STA GI ASLQPPDVPRLA+TARISL P +VEEFAPKI QVVDWFGQLQ VDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEGGNQR+D+ ETFENREAMIGAVPVFDEPYI+VPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

SwissProt top hits

e value

%identity

Alignment

A2XK57 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.2e-31

52.03

Show/hide

Query:  SKALPLLRGAS--SFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        + A+P LR A+     S ++Q  +    +  S P        ++ A+    +L+PPD+PRLA  ARISL+P + EEFAPKI QVVDWFGQLQ VDL+S+E
Subjt:  SKALPLLRGAS--SFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQ-RNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PS+RA T  GN  R D PETF NR+A+I +VP +D+PYIKVP+VLNKE
Subjt:  PSIRADTEGGNQ-RNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

B9INH0 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.8e-35

59.18

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGS+A+ LL+G S  P   S +F+         P S       +TA+G  +SL+PPDV RLA+TARISLTP QVEEF PKI QV+DW   L +VDL S+E
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEG N R+D PETFENREA+I AVP +++PY+KVPKVLNKE
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

B9RRX2 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

3.6e-36

59.46

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSN-ITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSI
        MGS+AL LL+ A     LK QI     T     P S  +T R  S  +   +SLQPPDV RLA+TARISL   +VEEFAPKI QV+DWFGQLQ VDL S+
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSN-ITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSI

Query:  EPSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        EP+IRAD+EG N R+D+PETF  REA+I AVP +++PY+KVPKVLNKE
Subjt:  EPSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

D7STK2 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

3.8e-41

61.22

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Query:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        MGS+AL LL+  ++    ++ +F S +T       S   IRNS+ +    ++L PPD+PRLA+TARISLTP +VEEFAPKI QV+DWFGQLQ VDLQSIE
Subjt:  MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PSIRADTEG N R+D PETFENREA+I A+P ++EPY+KVPKVLNK+
Subjt:  PSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

Q7XZZ1 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial

1.2e-31

52.03

Show/hide

Query:  SKALPLLRGAS--SFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE
        + A+P LR A+     S ++Q  +    +  S P        ++ A+    +L+PPD+PRLA  ARISL+P + EEFAPKI QVVDWFGQLQ VDL+S+E
Subjt:  SKALPLLRGAS--SFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIE

Query:  PSIRADTEGGNQ-RNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE
        PS+RA T  GN  R D PETF NR+A+I +VP +D+PYIKVP+VLNKE
Subjt:  PSIRADTEGGNQ-RNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G32915.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

7.3e-32

56.76

Show/hide

Query:  NITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEP
        N  I  S ++    + LQPPDV RLAQTARISLTP ++EE   KI +V+DWFGQLQ VD+ S+EP+IRA+ +GGN R D PETF+NR+++  ++P F++ 
Subjt:  NITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDIPETFENREAMIGAVPVFDEP

Query:  YIKVPKVLNKE
        Y+KVPK+LNKE
Subjt:  YIKVPKVLNKE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAGTAAAGCTCTTCCTCTGCTCAGAGGAGCTTCATCATTCCCATCGTTAAAGAGCCAAATCTTCATCTCTACCGCCACCGCCTTCCATTCCCTTCCTGTTTCTAA
CATCACAATCCGAAATTCTTCGACTGCTTCAGGAATTTTTGCCTCTCTTCAACCTCCCGATGTTCCTCGTTTAGCTCAAACAGCTCGTATTTCTCTCACTCCCACTCAGG
TTGAAGAATTTGCGCCTAAAATTACTCAAGTTGTTGACTGGTTTGGGCAGCTCCAGACAGTTGATCTTCAAAGTATTGAACCATCCATTAGAGCAGATACTGAAGGTGGC
AATCAGCGGAATGACATTCCTGAAACATTTGAAAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAGCCGTACATCAAAGTTCCCAAAGTTCTGAATAAGGA
GTAG

mRNA sequence

Show/hide mRNA sequence

TATAGCCCTTAAAATTGTTCAGTGTAACTTCAACTTGTCGATGTGGCGTAACTCGTGAGGATTGTGATAGAGATTAGAGAAAAGGCTGTGTATCAAAATTTGGCGAATAG
CTTCCATTTTGGTTTCCGCCAATAACAGTTGGATTGAAATGGGAAGTAAAGCTCTTCCTCTGCTCAGAGGAGCTTCATCATTCCCATCGTTAAAGAGCCAAATCTTCATC
TCTACCGCCACCGCCTTCCATTCCCTTCCTGTTTCTAACATCACAATCCGAAATTCTTCGACTGCTTCAGGAATTTTTGCCTCTCTTCAACCTCCCGATGTTCCTCGTTT
AGCTCAAACAGCTCGTATTTCTCTCACTCCCACTCAGGTTGAAGAATTTGCGCCTAAAATTACTCAAGTTGTTGACTGGTTTGGGCAGCTCCAGACAGTTGATCTTCAAA
GTATTGAACCATCCATTAGAGCAGATACTGAAGGTGGCAATCAGCGGAATGACATTCCTGAAACATTTGAAAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGAT
GAGCCGTACATCAAAGTTCCCAAAGTTCTGAATAAGGAGTAGTTGCTAAGACATGTCTCTTAGCTTGGGCTATTTCAAGGCATGGCCTGGCTGGGTCCATTGGTTACCCT
ATCTTATGAGGTGCAAATTCCCAATAAGAATATTCAGAATAATAATTATAAATATCTATCAACATGATTGATTGCATCTTATTAAATTAAGAAATTTCATCTATCTATAT
GGCCTCCATAAAATAATCAAGAATTTGCTCTTAATTTGAATGTCGTGCACTCCAAGTTCCTTTTACATATACCAGAAGGGAAATTTTATTAAGCAAGGCCATGGCTTAAA
CATCTAAATTTGAATTCAAACCTATAATTTATTTATTCTTTTTACATGAAATTATCATTTCCAAGGAAAGTTGATTTGAATT

Protein sequence

Show/hide protein sequence

MGSKALPLLRGASSFPSLKSQIFISTATAFHSLPVSNITIRNSSTASGIFASLQPPDVPRLAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGG
NQRNDIPETFENREAMIGAVPVFDEPYIKVPKVLNKE

PI0008327 (gene) of Melon (PI 482460) v1 genome