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PI0008332 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0008332
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-amylase
Genome locationchr02:7969000..7969377
RNA-Seq ExpressionPI0008332
SyntenyPI0008332
Gene Ontology termsGO:0000272 - polysaccharide catabolic process (biological process)
GO:0016161 - beta-amylase activity (molecular function)
GO:0102229 - amylopectin maltohydrolase activity (molecular function)
InterPro domainsIPR001554 - Glycoside hydrolase, family 14
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013452.1 Beta-amylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-1367.74Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        M NKV +RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +EE   M  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

KGN66609.1 hypothetical protein Csa_007076 [Cucumis sativus]1.1e-1462.96Show/hide
Query:  SFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSMVQGE
        SF+ MKGA                E AG YNFYRFEELLGMVEKY MKVHLSI APPLVQA  LL FEE N  STS+VQG+
Subjt:  SFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSMVQGE

XP_004147196.1 beta-amylase 1, chloroplastic [Cucumis sativus]7.6e-1674.19Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +E+LLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

XP_008460711.1 PREDICTED: beta-amylase 1, chloroplastic [Cucumis melo]1.3e-1574.19Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +E LLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

XP_038876128.1 beta-amylase 1, chloroplastic-like [Benincasa hispida]2.0e-1675.81Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER+G YNF  +EELLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

TrEMBL top hitse value%identityAlignment
A0A0A0LIF1 Beta-amylase3.7e-1674.19Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +E+LLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

A0A0A0LZZ7 Uncharacterized protein5.3e-1562.96Show/hide
Query:  SFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSMVQGE
        SF+ MKGA                E AG YNFYRFEELLGMVEKY MKVHLSI APPLVQA  LL FEE N  STS+VQG+
Subjt:  SFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSMVQGE

A0A1S3CDI9 Beta-amylase6.3e-1674.19Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +E LLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

A0A5D3D0N5 Beta-amylase6.3e-1674.19Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGNKVN+RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +E LLGM  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

A0A6J1KVP0 Beta-amylase2.9e-1367.74Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        M NKV +RKA+E SFQ MKGA VE VMVDVWWGLVEKER G YNF  +EE   M  KY +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

SwissProt top hitse value%identityAlignment
O23553 Beta-amylase 3, chloroplastic1.2e-0833.62Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSM---VQGEAAA
        M   +N+ +A+  S   +KGA VE VMVD WWGLVEK+    YN+  + EL+ MV+K+ +K+        +V +F        +SCS  +   V  E + 
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSM---VQGEAAA

Query:  QVSLIHRGKVMRKGEE
           L++  K  R+  E
Subjt:  QVSLIHRGKVMRKGEE

O65258 Beta-amylase 2, chloroplastic1.4e-0431.25Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHL
        M ++V + + +    +T+K   V+ VMVD WWG+VE     VYN+  +++L  M+ +  +K+ +
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHL

Q10RZ1 Beta-amylase 2, chloroplastic8.5e-1049.18Show/hide
Query:  GNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        GN +N+RKA+E S + +K A  E +MVDVWWG+ E E  G YNF  + EL+ M +K  +KV
Subjt:  GNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

Q9AV88 Beta-amylase 1, chloroplastic1.9e-0949.18Show/hide
Query:  GNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        G+ +N+RKA+  S   +K A VE +MVDVWWG+VE E  G YNF  + EL+ M  K  +KV
Subjt:  GNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

Q9LIR6 Beta-amylase 1, chloroplastic1.1e-1254.84Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGN VN+RKA++ S Q +K A VE +M+DVWWGLVEKE  G YN+  + ELL + +K  +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

Arabidopsis top hitse value%identityAlignment
AT3G23920.1 beta-amylase 17.6e-1454.84Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV
        MGN VN+RKA++ S Q +K A VE +M+DVWWGLVEKE  G YN+  + ELL + +K  +KV
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKV

AT4G00490.1 beta-amylase 21.0e-0531.25Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHL
        M ++V + + +    +T+K   V+ VMVD WWG+VE     VYN+  +++L  M+ +  +K+ +
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHL

AT4G17090.1 chloroplast beta-amylase8.7e-1033.62Show/hide
Query:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSM---VQGEAAA
        M   +N+ +A+  S   +KGA VE VMVD WWGLVEK+    YN+  + EL+ MV+K+ +K+        +V +F        +SCS  +   V  E + 
Subjt:  MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSM---VQGEAAA

Query:  QVSLIHRGKVMRKGEE
           L++  K  R+  E
Subjt:  QVSLIHRGKVMRKGEE

AT5G18670.1 beta-amylase 31.0e-0535.94Show/hide
Query:  NKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSI
        N VN  KAI    + +K   VE + + ++WG+VEKE AG Y +  +  +  +V+K  +K+H S+
Subjt:  NKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSI

AT5G55700.1 beta-amylase 48.5e-0530.16Show/hide
Query:  KVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSI
        K+ + KA+  S + +K A V  + V+VWWG+VE+     + +  +EEL  ++ +  +K+H+++
Subjt:  KVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATAAGGTGAATCAAAGGAAGGCGATCGAGGGGAGTTTCCAGACCATGAAAGGGGCTGAAGTGGAGTGGGTTATGGTAGATGTGTGGTGGGGATTGGTGGAGAA
GGAAAGGGCCGGCGTCTATAATTTCTACAGATTTGAAGAGCTTTTGGGTATGGTGGAGAAATACAGGATGAAAGTTCACCTGTCTATTGGTGCACCACCGTTGGTTCAAG
CTTTCACCTTGCTGCCGTTCGAAGAAGTCAACAGTTGTTCGACTTCAATGGTTCAAGGAGAAGCAGCAGCTCAAGTTTCCCTTATTCATCGTGGAAAAGTCATGCGCAAG
GGAGAAGAATCGTTCAAGCCTTTGTCTTTTCAGGATTTTATTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATAAGGTGAATCAAAGGAAGGCGATCGAGGGGAGTTTCCAGACCATGAAAGGGGCTGAAGTGGAGTGGGTTATGGTAGATGTGTGGTGGGGATTGGTGGAGAA
GGAAAGGGCCGGCGTCTATAATTTCTACAGATTTGAAGAGCTTTTGGGTATGGTGGAGAAATACAGGATGAAAGTTCACCTGTCTATTGGTGCACCACCGTTGGTTCAAG
CTTTCACCTTGCTGCCGTTCGAAGAAGTCAACAGTTGTTCGACTTCAATGGTTCAAGGAGAAGCAGCAGCTCAAGTTTCCCTTATTCATCGTGGAAAAGTCATGCGCAAG
GGAGAAGAATCGTTCAAGCCTTTGTCTTTTCAGGATTTTATTAATTAG
Protein sequenceShow/hide protein sequence
MGNKVNQRKAIEGSFQTMKGAEVEWVMVDVWWGLVEKERAGVYNFYRFEELLGMVEKYRMKVHLSIGAPPLVQAFTLLPFEEVNSCSTSMVQGEAAAQVSLIHRGKVMRK
GEESFKPLSFQDFIN